Difference between revisions of "RXN0-5114"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene CHC_T00008944001 == * left end position: ** 259008 * transcription direction: ** POSITIVE * right end position: ** 260300 * centisome position: ** 84...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene CHC_T00008944001 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5114 RXN0-5114] ==
−
* left end position:
+
* direction:
−
** 259008
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* ec number:
−
** POSITIVE
+
** [http://enzyme.expasy.org/EC/3.1.3.3 EC-3.1.3.3]
−
* right end position:
+
−
** 260300
+
−
* centisome position:
+
−
** 84.09378   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[PROTEIN-KINASE-RXN]]
+
* With identifiers:
−
** original_genome
+
** 1 [[WATER]][c] '''+''' 1 [[3-P-SERINE]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[SER]][c]
−
***automated-name-match
+
* With common name(s):
−
== Pathways associated ==
+
** 1 H2O[c] '''+''' 1 3-phospho-L-serine[c] '''=>''' 1 phosphate[c] '''+''' 1 L-serine[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[CHC_T00007222001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
* Gene: [[CHC_T00005163001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
* Gene: [[CHC_T00006166001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
== Pathways ==
 +
* [[SERSYN-PWY]], L-serine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=SERSYN-PWY SERSYN-PWY]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=259008}}
+
* RHEA:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21208 21208]
−
{{#set: right end position=260300}}
+
* LIGAND-RXN:
−
{{#set: centisome position=84.09378    }}
+
** [http://www.genome.jp/dbget-bin/www_bget?R00582 R00582]
−
{{#set: reaction associated=PROTEIN-KINASE-RXN}}
+
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: ec number=EC-3.1.3.3}}
 +
{{#set: gene associated=CHC_T00007222001_1|CHC_T00005163001_1|CHC_T00006166001_1}}
 +
{{#set: in pathway=SERSYN-PWY}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:42, 9 January 2019

Reaction RXN0-5114

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 3-phospho-L-serine[c] => 1 phosphate[c] + 1 L-serine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • SERSYN-PWY, L-serine biosynthesis: SERSYN-PWY
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN0-5114&oldid=22150"