Difference between revisions of "2.7.9.3-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.9.3-RXN 2.7.9.3-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org...")
 
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== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[SE-2]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[SEPO3]][c] '''+''' 1 [[AMP]][c]
+
** 1 [[SE-2]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[SEPO3]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 H2O[c] '''+''' 1 selenide[c] '''=>''' 1 phosphate[c] '''+''' 1 selenophosphate[c] '''+''' 1 AMP[c]
+
** 1 selenide[c] '''+''' 1 ATP[c] '''+''' 1 H2O[c] '''=>''' 1 selenophosphate[c] '''+''' 1 AMP[c] '''+''' 1 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Line 19: Line 19:
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY0-901]], L-selenocysteine biosynthesis I (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-901 PWY0-901]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
* [[PWY-6281]], L-selenocysteine biosynthesis II (archaea and eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6281 PWY-6281]
 
* [[PWY-6281]], L-selenocysteine biosynthesis II (archaea and eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6281 PWY-6281]
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY0-901]], L-selenocysteine biosynthesis I (bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-901 PWY0-901]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
−
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-galdieria.sulphuraria]]
 
** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18737 18737]
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18737 18737]
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03595 R03595]
 
 
* UNIPROT:
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/Q9PMF9 Q9PMF9]
 
** [http://www.uniprot.org/uniprot/Q9PMF9 Q9PMF9]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03595 R03595]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: ec number=EC-2.7.9.3}}
 
{{#set: ec number=EC-2.7.9.3}}
 
{{#set: gene associated=CHC_T00005216001_1}}
 
{{#set: gene associated=CHC_T00005216001_1}}
−
{{#set: in pathway=PWY0-901|PWY-6281}}
+
{{#set: in pathway=PWY-6281|PWY0-901}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}}
+
{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:45, 9 January 2019

Reaction 2.7.9.3-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 selenide[c] + 1 ATP[c] + 1 H2O[c] => 1 selenophosphate[c] + 1 AMP[c] + 1 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6281, L-selenocysteine biosynthesis II (archaea and eukaryotes): PWY-6281
    • 2 reactions found over 4 reactions in the full pathway
  • PWY0-901, L-selenocysteine biosynthesis I (bacteria): PWY0-901
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




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