Difference between revisions of "LINOLENOYL-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LINOLENOYL-RXN LINOLENOYL-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** long-chain-fatty-...") |
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** Source: [[orthology-galdieria.sulphuraria]] | ** Source: [[orthology-galdieria.sulphuraria]] | ||
== Pathways == | == Pathways == | ||
| − | |||
| − | |||
* [[PWY-7724]], icosapentaenoate biosynthesis III (8-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7724 PWY-7724] | * [[PWY-7724]], icosapentaenoate biosynthesis III (8-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7724 PWY-7724] | ||
| + | ** '''2''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[PWY-7049]], icosapentaenoate biosynthesis II (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7049 PWY-7049] | ||
** '''2''' reactions found over '''7''' reactions in the full pathway | ** '''2''' reactions found over '''7''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| − | |||
| − | |||
** Source: [[orthology-galdieria.sulphuraria]] | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 52: | Line 52: | ||
{{#set: ec number=EC-6.2.1.3}} | {{#set: ec number=EC-6.2.1.3}} | ||
{{#set: gene associated=CHC_T00008500001_1|CHC_T00009428001|CHC_T00009428001_1|CHC_T00008160001_1|CHC_T00008811001|CHC_T00008811001_1}} | {{#set: gene associated=CHC_T00008500001_1|CHC_T00009428001|CHC_T00009428001_1|CHC_T00008160001_1|CHC_T00008811001|CHC_T00008811001_1}} | ||
| − | {{#set: in pathway=PWY- | + | {{#set: in pathway=PWY-7724|PWY-7049}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus | + | {{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 17:48, 9 January 2019
Contents
Reaction LINOLENOYL-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- long-chain-fatty-acid-CoA ligase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CO-A[c] + 1 LINOLENIC_ACID[c] + 1 ATP[c] => 1 AMP[c] + 1 PPI[c] + 1 LINOLENOYL-COA[c]
- With common name(s):
- 1 coenzyme A[c] + 1 α-linolenate[c] + 1 ATP[c] => 1 AMP[c] + 1 diphosphate[c] + 1 α-linolenoyl-CoA[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00008500001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00009428001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00009428001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00008160001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00008811001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00008811001_1
- Source: orthology-galdieria.sulphuraria
Pathways
- PWY-7724, icosapentaenoate biosynthesis III (8-desaturase, mammals): PWY-7724
- 2 reactions found over 7 reactions in the full pathway
- PWY-7049, icosapentaenoate biosynthesis II (6-desaturase, mammals): PWY-7049
- 2 reactions found over 7 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
