Difference between revisions of "CHC 25"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-461 RXN1F-461] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-461 RXN1F-461] ==
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== Gene CHC_25 ==
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* direction:
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* common name:
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** LEFT-TO-RIGHT
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** psaF
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.4.1.91 EC-2.4.1.91]
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** 3418
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* transcription direction:
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** POSITIVE
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* right end position:
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** 3981
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* centisome position:
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** 1.8979821   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-15479]]
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** 1 [[CPD1F-90]][c] '''+''' 1 [[CPD-12575]][c] '''=>''' 1 [[CPD1F-453]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
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** Source: [[annotation-original_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 kaempferol[c] '''+''' 1 UDP-α-D-glucose[c] '''=>''' 1 kaempferol-3-glucoside[c] '''+''' 1 H+[c] '''+''' 1 UDP[c]
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== Pathways associated ==
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* [[PWY-101]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[CHC_T00000989001_1]]
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** [[pantograph]]-[[a.taliana]]
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* [[CHC_T00003244001_1]]
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** [[pantograph]]-[[a.taliana]]
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* [[CHC_T00001656001_1]]
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** [[pantograph]]-[[a.taliana]]
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== Pathways ==
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* [[PWY-7143]], kaempferol gentiobioside biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7143 PWY-7143]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-5320]], kaempferol glycoside biosynthesis (Arabidopsis): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5320 PWY-5320]
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** '''1''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-5348]], kaempferol triglucoside biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5348 PWY-5348]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7168]]: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7168 PWY-7168]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[a.taliana]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=psaF}}
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{{#set: ec number=EC-2.4.1.91}}
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{{#set: left end position=3418}}
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{{#set: gene associated=CHC_T00000989001_1|CHC_T00003244001_1|CHC_T00001656001_1}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: in pathway=PWY-7143|PWY-5320|PWY-5348|PWY-7168}}
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{{#set: right end position=3981}}
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{{#set: reconstruction category=orthology}}
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{{#set: centisome position=1.8979821    }}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reaction associated=RXN-15479}}
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{{#set: reconstruction source=a.taliana}}
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{{#set: pathway associated=PWY-101}}

Latest revision as of 17:49, 9 January 2019

Gene CHC_25

  • common name:
    • psaF
  • left end position:
    • 3418
  • transcription direction:
    • POSITIVE
  • right end position:
    • 3981
  • centisome position:
    • 1.8979821
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CHC_25&oldid=22309"