Difference between revisions of "6.2.1.34-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene CHC_T00009019001 == * left end position: ** 97869 * transcription direction: ** POSITIVE * right end position: ** 99044 * centisome position: ** 45.7...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene CHC_T00009019001 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.2.1.34-RXN 6.2.1.34-RXN] ==
−
* left end position:
+
* direction:
−
** 97869
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* ec number:
−
** POSITIVE
+
** [http://enzyme.expasy.org/EC/6.2.1.34 EC-6.2.1.34]
−
* right end position:
+
−
** 99044
+
−
* centisome position:
+
−
** 45.70349   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[2.1.1.79-RXN]]
+
* With identifiers:
−
** original_genome
+
** 1 [[FERULIC-ACID]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[FERULOYL-COA]][c]
−
***automated-name-match
+
* With common name(s):
−
* [[RXN-7421]]
+
** 1 ferulate[c] '''+''' 1 ATP[c] '''+''' 1 coenzyme A[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 feruloyl-CoA[c]
−
** original_genome
+
 
−
***automated-name-match
+
== Genes associated with this reaction  ==
−
* [[RXN1G-2544]]
+
Genes have been associated with this reaction based on different elements listed below.
−
** original_genome
+
* Gene: [[CHC_T00008472001_1]]
−
***automated-name-match
+
** Source: [[orthology-arabidopsis_thaliana]]
−
* [[RXN1G-3641]]
+
* Gene: [[CHC_T00008160001_1]]
−
** original_genome
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
***automated-name-match
+
** Source: [[orthology-arabidopsis_thaliana]]
−
== Pathways associated ==
+
== Pathways  ==
−
* [[PWY-4942]]
+
* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
−
* [[PWY0-541]]
+
** '''8''' reactions found over '''19''' reactions in the full pathway
−
* [[PWYG-321]]
+
* [[PWY-6343]], ferulate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6343 PWY-6343]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=97869}}
+
* LIGAND-RXN:
−
{{#set: transcription direction=POSITIVE}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R02194 R02194]
−
{{#set: right end position=99044}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: centisome position=45.70349    }}
+
{{#set: ec number=EC-6.2.1.34}}
−
{{#set: reaction associated=2.1.1.79-RXN|RXN-7421|RXN1G-2544|RXN1G-3641}}
+
{{#set: gene associated=CHC_T00008472001_1|CHC_T00008160001_1}}
−
{{#set: pathway associated=PWY-4942|PWY0-541|PWYG-321}}
+
{{#set: in pathway=PWY-1121|PWY-6343}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 16:49, 9 January 2019

Reaction 6.2.1.34-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ferulate[c] + 1 ATP[c] + 1 coenzyme A[c] => 1 AMP[c] + 1 diphosphate[c] + 1 feruloyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-1121, suberin monomers biosynthesis: PWY-1121
    • 8 reactions found over 19 reactions in the full pathway
  • PWY-6343, ferulate degradation: PWY-6343
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=6.2.1.34-RXN&oldid=22322"