|
|
(2 intermediate revisions by the same user not shown) |
Line 1: |
Line 1: |
− | [[Category:Reaction]] | + | [[Category:Pathway]] |
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DLACTDEHYDROGNAD-RXN DLACTDEHYDROGNAD-RXN] == | + | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5054 PWY-5054] == |
− | * direction: | + | * common name: |
− | ** LEFT-TO-RIGHT | + | ** sorbitol biosynthesis I |
− | * ec number: | + | * taxonomic range: |
− | ** [http://enzyme.expasy.org/EC/1.1.1.28 EC-1.1.1.28] | + | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3745 TAX-3745] |
| * Synonym(s): | | * Synonym(s): |
| | | |
− | == Reaction Formula == | + | == Reaction(s) found == |
− | * With identifiers:
| + | '''1''' reactions found over '''3''' reactions in the full pathway |
− | ** 1 [[NADH]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[D-LACTATE]][c]
| + | * [[PGLUCISOM-RXN]] |
− | * With common name(s): | + | ** 3 associated gene(s): |
− | ** 1 NADH[c] '''+''' 1 pyruvate[c] '''+''' 1 H+[c] '''=>''' 1 NAD+[c] '''+''' 1 (R)-lactate[c] | + | *** [[CHC_T00009370001]] |
− | | + | *** [[CHC_T00009370001_1]] |
− | == Genes associated with this reaction ==
| + | *** [[CHC_T00008268001_1]] |
− | Genes have been associated with this reaction based on different elements listed below.
| + | ** 3 reconstruction source(s) associated: |
− | * [[CHC_T00003974001_1]] | + | *** [[orthology-galdieria.sulphuraria]] |
− | ** [[pantograph]]-[[galdieria.sulphuraria]] | + | *** [[annotation-original_genome]] |
− | == Pathways ==
| + | *** [[orthology-ectocarpus_siliculosus]] |
− | * [[PWY-6901]], superpathway of glucose and xylose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6901 PWY-6901] | + | == Reaction(s) not found == |
− | ** '''9''' reactions found over '''12''' reactions in the full pathway | + | * [http://metacyc.org/META/NEW-IMAGE?object=ALDOSE-6-PHOSPHATE-REDUCTASE-NADPH-RXN ALDOSE-6-PHOSPHATE-REDUCTASE-NADPH-RXN] |
− | * [[FERMENTATION-PWY]], mixed acid fermentation: [http://metacyc.org/META/NEW-IMAGE?object=FERMENTATION-PWY FERMENTATION-PWY] | + | * [http://metacyc.org/META/NEW-IMAGE?object=SORBITOL-6-PHOSPHATASE-RXN SORBITOL-6-PHOSPHATASE-RXN] |
− | ** '''11''' reactions found over '''16''' reactions in the full pathway | + | |
− | * [[ALACAT2-PWY]], L-alanine degradation II (to D-lactate): [http://metacyc.org/META/NEW-IMAGE?object=ALACAT2-PWY ALACAT2-PWY] | + | |
− | ** '''2''' reactions found over '''3''' reactions in the full pathway
| + | |
− | * [[PWY-6454]], vancomycin resistance I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6454 PWY-6454]
| + | |
− | ** '''1''' reactions found over '''3''' reactions in the full pathway
| + | |
− | * [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
| + | |
− | ** '''15''' reactions found over '''18''' reactions in the full pathway | + | |
− | * [[PWY4LZ-257]], superpathway of fermentation (Chlamydomonas reinhardtii): [http://metacyc.org/META/NEW-IMAGE?object=PWY4LZ-257 PWY4LZ-257]
| + | |
− | ** '''6''' reactions found over '''13''' reactions in the full pathway
| + | |
− | == Reconstruction information ==
| + | |
− | * [[orthology]]:
| + | |
− | ** [[pantograph]]:
| + | |
− | *** [[galdieria.sulphuraria]]
| + | |
| == External links == | | == External links == |
− | * RHEA:
| + | {{#set: common name=sorbitol biosynthesis I}} |
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16369 16369]
| + | {{#set: taxonomic range=TAX-3745}} |
− | * LIGAND-RXN:
| + | {{#set: reaction found=1}} |
− | ** [http://www.genome.jp/dbget-bin/www_bget?R00704 R00704]
| + | {{#set: total reaction=3}} |
− | * UNIPROT:
| + | {{#set: completion rate=33.0}} |
− | ** [http://www.uniprot.org/uniprot/P26297 P26297]
| + | |
− | ** [http://www.uniprot.org/uniprot/P26298 P26298]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q7M4J0 Q7M4J0]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9R553 Q9R553]
| + | |
− | ** [http://www.uniprot.org/uniprot/P06149 P06149]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9JT76 Q9JT76]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q9JUP8 Q9JUP8]
| + | |
− | ** [http://www.uniprot.org/uniprot/P52643 P52643]
| + | |
− | ** [http://www.uniprot.org/uniprot/P45295 P45295]
| + | |
− | ** [http://www.uniprot.org/uniprot/P30901 P30901]
| + | |
− | ** [http://www.uniprot.org/uniprot/Q89388 Q89388]
| + | |
− | {{#set: direction=LEFT-TO-RIGHT}} | + | |
− | {{#set: ec number=EC-1.1.1.28}} | + | |
− | {{#set: gene associated=CHC_T00003974001_1}} | + | |
− | {{#set: in pathway=PWY-6901|FERMENTATION-PWY|ALACAT2-PWY|PWY-6454|P122-PWY|PWY4LZ-257}} | + | |
− | {{#set: reconstruction category=orthology}}
| + | |
− | {{#set: reconstruction tool=pantograph}}
| + | |
− | {{#set: reconstruction source=galdieria.sulphuraria}} | + | |