Difference between revisions of "RXN-11109"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Sugar-Phosphate Sugar-Phosphate] == * common name: ** a sugar phosphate * Synonym(s): == React...")
 
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Sugar-Phosphate Sugar-Phosphate] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11109 RXN-11109] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** a sugar phosphate
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** DEAD box RNA helicase, putative
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* ec number:
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** [http://enzyme.expasy.org/EC/3.6.4.13 EC-3.6.4.13]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[TRANS-RXN1HP7-34]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[ATP]][c] '''+''' 1 [[Wound-RNA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[Unwound-RNA]][c] '''+''' 1 [[PROTON]][c]
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* [[TRANS-RXN1HP7-34]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 ATP[c] '''+''' 1 wound RNA[c] '''+''' 1 H2O[c] '''=>''' 1 ADP[c] '''+''' 1 phosphate[c] '''+''' 1 an unwound RNA[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00010215001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00007274001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00010308001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00010233001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00009449001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00004762001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00010014001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00008748001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00010189001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00010236001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00002063001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00010264001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00010142001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00010060001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00008647001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00010340001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00004041001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00005385001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00006912001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00002773001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00003761001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00010236001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00010221001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00010296001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00010240001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00010310001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00000427001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00010115001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00006787001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00010142001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=a sugar phosphate}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: consumed by=TRANS-RXN1HP7-34}}
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{{#set: common name=DEAD box RNA helicase, putative}}
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{{#set: produced by=TRANS-RXN1HP7-34}}
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{{#set: ec number=EC-3.6.4.13}}
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{{#set: gene associated=CHC_T00010215001_1|CHC_T00007274001_1|CHC_T00010308001_1|CHC_T00010233001_1|CHC_T00009449001_1|CHC_T00004762001_1|CHC_T00010014001_1|CHC_T00008748001_1|CHC_T00010189001_1|CHC_T00010236001_1|CHC_T00002063001_1|CHC_T00010264001_1|CHC_T00010142001|CHC_T00010060001_1|CHC_T00008647001_1|CHC_T00010340001_1|CHC_T00004041001_1|CHC_T00005385001_1|CHC_T00006912001_1|CHC_T00002773001_1|CHC_T00003761001_1|CHC_T00010236001|CHC_T00010221001_1|CHC_T00010296001_1|CHC_T00010240001_1|CHC_T00010310001_1|CHC_T00000427001_1|CHC_T00010115001_1|CHC_T00006787001_1|CHC_T00010142001_1}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 18:00, 9 January 2019

Reaction RXN-11109

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • DEAD box RNA helicase, putative
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 wound RNA[c] + 1 H2O[c] => 1 ADP[c] + 1 phosphate[c] + 1 an unwound RNA[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-11109&oldid=22579"