Difference between revisions of "CYTIDINE"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2OXOGLUTDECARB-RXN 2OXOGLUTDECARB-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** dihydroli...")
 
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2OXOGLUTDECARB-RXN 2OXOGLUTDECARB-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CYTIDINE CYTIDINE] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** C(C2(C(C(C(N1(C(N=C(C=C1)N)=O))O2)O)O))O
 +
* molecular weight:
 +
** 243.219   
 +
* inchi key:
 +
** InChIKey=UHDGCWIWMRVCDJ-XVFCMESISA-N
 
* common name:
 
* common name:
−
** dihydrolipoamide dehydrogenase
+
** cytidine
−
** 2-oxoglutarate dehydrogenase, E1 component
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/1.2.4.2 EC-1.2.4.2]
+
 
* Synonym(s):
 
* Synonym(s):
−
** Oxoglutarate decarboxylase
 
−
** 2-oxoglutarate decarboxylation
 
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[CYTIDEAM2-RXN]]
−
** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[Oxo-glutarate-dehydrogenase-lipoyl]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[Oxo-glutarate-dehydro-suc-DH-lipoyl]][c]
+
== Reaction(s) known to produce the compound ==
−
* With common name(s):
+
* [[RXN-14026]]
−
** 1 2-oxoglutarate[c] '''+''' 1 a [2-oxoglutarate dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 a [2-oxoglutarate dehydrogenase E2 protein] N6-S-succinyldihydrolipoyl-L-lysine[c]
+
== Reaction(s) of unknown directionality ==
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[CHC_T00010287001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00008441001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00008312001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00008441001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00008312001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
== Pathways  ==
+
−
* [[PWY66-398]], TCA cycle III (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398]
+
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
−
* [[PWY-5084]], 2-oxoglutarate decarboxylation to succinyl-CoA: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5084 PWY-5084]
+
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[galdieria.sulphuraria]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
* METABOLIGHTS : MTBLC17562
−
** [http://www.uniprot.org/uniprot/P23129 P23129]
+
* CAS : 65-46-3
−
** [http://www.uniprot.org/uniprot/Q02218 Q02218]
+
* LIGAND-CPD:
−
** [http://www.uniprot.org/uniprot/Q60597 Q60597]
+
** [http://www.genome.jp/dbget-bin/www_bget?C00475 C00475]
−
** [http://www.uniprot.org/uniprot/Q9JRJ8 Q9JRJ8]
+
* HMDB : HMDB00089
−
** [http://www.uniprot.org/uniprot/P20967 P20967]
+
* CHEMSPIDER:
−
** [http://www.uniprot.org/uniprot/P0AFG3 P0AFG3]
+
** [http://www.chemspider.com/Chemical-Structure.5940.html 5940]
−
** [http://www.uniprot.org/uniprot/P20707 P20707]
+
* CHEBI:
−
** [http://www.uniprot.org/uniprot/P51056 P51056]
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=17562 17562]
−
** [http://www.uniprot.org/uniprot/Q56600 Q56600]
+
* DRUGBANK : DB02097
−
** [http://www.uniprot.org/uniprot/O49541 O49541]
+
* PUBCHEM:
−
** [http://www.uniprot.org/uniprot/Q59106 Q59106]
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=6175 6175]
−
** [http://www.uniprot.org/uniprot/Q9M2T8 Q9M2T8]
+
* BIGG : cytd
−
** [http://www.uniprot.org/uniprot/Q9ZRQ2 Q9ZRQ2]
+
{{#set: smiles=C(C2(C(C(C(N1(C(N=C(C=C1)N)=O))O2)O)O))O}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: molecular weight=243.219    }}
−
{{#set: common name=dihydrolipoamide dehydrogenase}}
+
{{#set: inchi key=InChIKey=UHDGCWIWMRVCDJ-XVFCMESISA-N}}
−
{{#set: common name=2-oxoglutarate dehydrogenase, E1 component}}
+
{{#set: common name=cytidine}}
−
{{#set: ec number=EC-1.2.4.2}}
+
{{#set: consumed by=CYTIDEAM2-RXN}}
−
{{#set: common name=Oxoglutarate decarboxylase|2-oxoglutarate decarboxylation}}
+
{{#set: produced by=RXN-14026}}
−
{{#set: gene associated=CHC_T00010287001_1|CHC_T00008441001|CHC_T00008312001_1|CHC_T00008441001_1|CHC_T00008312001}}
+
−
{{#set: in pathway=PWY66-398|PWY-5084}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=galdieria.sulphuraria}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=original_genome}}
+

Latest revision as of 17:03, 9 January 2019

Metabolite CYTIDINE

  • smiles:
    • C(C2(C(C(C(N1(C(N=C(C=C1)N)=O))O2)O)O))O
  • molecular weight:
    • 243.219
  • inchi key:
    • InChIKey=UHDGCWIWMRVCDJ-XVFCMESISA-N
  • common name:
    • cytidine
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • METABOLIGHTS : MTBLC17562
  • CAS : 65-46-3
  • LIGAND-CPD:
  • HMDB : HMDB00089
  • CHEMSPIDER:
  • CHEBI:
  • DRUGBANK : DB02097
  • PUBCHEM:
  • BIGG : cytd




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CYTIDINE&oldid=22625"