Difference between revisions of "CHC T00009195001"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN] == * direction: ** LEFT-TO-RIG...")
 
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN] ==
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== Gene CHC_T00009195001 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 28243
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/3.6.1.67 EC-3.6.1.67]
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** NEGATIVE
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* right end position:
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** 29166
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* centisome position:
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** 79.13643   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN]]
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** 1 [[DIHYDRONEOPTERIN-P3]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[DIHYDRONEOPTERIN-P]][c]
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** Source: [[annotation-original_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 7,8-dihydroneopterin 3'-triphosphate[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 diphosphate[c] '''+''' 1 7,8-dihydroneopterin 3'-phosphate[c]
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* Reaction: [[RXN-15043]]
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** Source: [[annotation-original_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-16025]]
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* [[CHC_T00010215001_1]]
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** Source: [[annotation-original_genome]]
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** [[pantograph]]-[[a.taliana]]
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*** Assignment: automated-name-match
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* [[CHC_T00010343001_1]]
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* Reaction: [[RXN-16032]]
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** [[pantograph]]-[[a.taliana]]
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** Source: [[annotation-original_genome]]
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* [[CHC_T00000109001_1]]
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*** Assignment: automated-name-match
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** [[pantograph]]-[[a.taliana]]
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* Reaction: [[RXN-16066]]
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* [[CHC_T00005127001_1]]
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** Source: [[annotation-original_genome]]
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** [[pantograph]]-[[a.taliana]]
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*** Assignment: automated-name-match
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* [[CHC_T00010240001_1]]
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* Reaction: [[RXN-16067]]
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** [[pantograph]]-[[a.taliana]]
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** Source: [[annotation-original_genome]]
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* [[CHC_T00010340001_1]]
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*** Assignment: automated-name-match
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** [[pantograph]]-[[a.taliana]]
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* Reaction: [[RXN-16076]]
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* [[CHC_T00009449001_1]]
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** Source: [[annotation-original_genome]]
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** [[pantograph]]-[[a.taliana]]
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*** Assignment: automated-name-match
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* [[CHC_T00008309001_1]]
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* Reaction: [[RXN-16077]]
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** [[pantograph]]-[[a.taliana]]
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** Source: [[annotation-original_genome]]
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* [[CHC_T00002083001_1]]
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*** Assignment: automated-name-match
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** [[pantograph]]-[[a.taliana]]
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* Reaction: [[RXN-16118]]
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* [[CHC_T00001386001_1]]
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** Source: [[annotation-original_genome]]
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** [[pantograph]]-[[a.taliana]]
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*** Assignment: automated-name-match
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* [[CHC_T00003907001_1]]
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* Reaction: [[RXN-1623]]
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** [[pantograph]]-[[a.taliana]]
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** Source: [[annotation-original_genome]]
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* [[CHC_T00007752001_1]]
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*** Assignment: automated-name-match
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** [[pantograph]]-[[a.taliana]]
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* Reaction: [[RXN-17008]]
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* [[CHC_T00003258001_1]]
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** Source: [[annotation-original_genome]]
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** [[pantograph]]-[[a.taliana]]
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*** Assignment: automated-name-match
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* [[CHC_T00003332001_1]]
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* Reaction: [[RXN-17009]]
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** [[pantograph]]-[[a.taliana]]
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** Source: [[annotation-original_genome]]
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* [[CHC_T00007861001_1]]
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*** Assignment: automated-name-match
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** [[pantograph]]-[[a.taliana]]
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* Reaction: [[RXN-17010]]
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* [[CHC_T00010142001_1]]
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** Source: [[annotation-original_genome]]
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** [[pantograph]]-[[a.taliana]]
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*** Assignment: automated-name-match
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* [[CHC_T00002743001_1]]
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* Reaction: [[RXN-17011]]
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** [[pantograph]]-[[a.taliana]]
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** Source: [[annotation-original_genome]]
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* [[CHC_T00003277001_1]]
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*** Assignment: automated-name-match
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** [[pantograph]]-[[a.taliana]]
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* Reaction: [[RXN-17012]]
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* [[CHC_T00000137001_1]]
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** Source: [[annotation-original_genome]]
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** [[pantograph]]-[[a.taliana]]
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*** Assignment: automated-name-match
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* [[CHC_T00010119001_1]]
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* Reaction: [[RXN-17013]]
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** [[pantograph]]-[[a.taliana]]
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** Source: [[annotation-original_genome]]
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== Pathways  ==
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*** Assignment: automated-name-match
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* [[PWY-6147]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6147 PWY-6147]
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* Reaction: [[RXN-17014]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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** Source: [[annotation-original_genome]]
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== Reconstruction information  ==
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*** Assignment: automated-name-match
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* [[orthology]]:
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* Reaction: [[RXN-17015]]
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** [[pantograph]]:
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** Source: [[annotation-original_genome]]
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*** [[a.taliana]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17019]]
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** Source: [[annotation-original_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17020]]
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** Source: [[annotation-original_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17021]]
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** Source: [[annotation-original_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17022]]
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** Source: [[annotation-original_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17023]]
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** Source: [[annotation-original_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17024]]
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** Source: [[annotation-original_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN-17729]]
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** Source: [[annotation-original_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN0-5514]]
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** Source: [[annotation-original_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN0-6705]]
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** Source: [[annotation-original_genome]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-7782]]
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* [[PWY-7589]]
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* [[PWY-5667]]
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* [[PWY-7587]]
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* [[PWY0-1319]]
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* [[PWY-5981]]
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* [[TRIGLSYN-PWY]]
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* [[PWY-7411]]
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* [[PWY-6453]]
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* [[PWY-7417]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=28243}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25302 25302]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=29166}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04638 R04638]
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{{#set: centisome position=79.13643    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN|RXN-15043|RXN-16025|RXN-16032|RXN-16066|RXN-16067|RXN-16076|RXN-16077|RXN-16118|RXN-1623|RXN-17008|RXN-17009|RXN-17010|RXN-17011|RXN-17012|RXN-17013|RXN-17014|RXN-17015|RXN-17019|RXN-17020|RXN-17021|RXN-17022|RXN-17023|RXN-17024|RXN-17729|RXN0-5514|RXN0-6705}}
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{{#set: ec number=EC-3.6.1.67}}
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{{#set: pathway associated=PWY-7782|PWY-7589|PWY-5667|PWY-7587|PWY0-1319|PWY-5981|TRIGLSYN-PWY|PWY-7411|PWY-6453|PWY-7417}}
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{{#set: gene associated=CHC_T00010215001_1|CHC_T00010343001_1|CHC_T00000109001_1|CHC_T00005127001_1|CHC_T00010240001_1|CHC_T00010340001_1|CHC_T00009449001_1|CHC_T00008309001_1|CHC_T00002083001_1|CHC_T00001386001_1|CHC_T00003907001_1|CHC_T00007752001_1|CHC_T00003258001_1|CHC_T00003332001_1|CHC_T00007861001_1|CHC_T00010142001_1|CHC_T00002743001_1|CHC_T00003277001_1|CHC_T00000137001_1|CHC_T00010119001_1}}
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−
{{#set: in pathway=PWY-6147}}
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{{#set: reconstruction category=orthology}}
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−
{{#set: reconstruction tool=pantograph}}
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−
{{#set: reconstruction source=a.taliana}}
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Latest revision as of 18:05, 9 January 2019

Gene CHC_T00009195001

  • left end position:
    • 28243
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 29166
  • centisome position:
    • 79.13643
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CHC_T00009195001&oldid=22672"