Difference between revisions of "RXN-161"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11480 RXN-11480] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-(acyl-carrier-pro...")
 
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11480 RXN-11480] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-161 RXN-161] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
−
* common name:
+
−
** 3-oxoacyl-(acyl-carrier-protein) reductase
+
−
** 3-oxoacyl-[acyl-carrier-protein] reductase
+
−
** beta-ketoacyl reductase
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* ec number:
 
* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
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** [http://enzyme.expasy.org/EC/1.1.1 EC-1.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[3-Ketopimeloyl-ACP-methyl-esters]][c] '''=>''' 1 [[3-hydroxypimeloyl-ACP-methyl-esters]][c] '''+''' 1 [[NADP]][c]
+
** 1 [[BUTANOL]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[BUTANAL]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 NADPH[c] '''+''' 1 a 3-oxo-pimeloyl-[acp] methyl ester[c] '''=>''' 1 a (3R)-3-hydroxypimeloyl-[acp] methyl ester[c] '''+''' 1 NADP+[c]
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** 1 butan-1-ol[c] '''+''' 1 NAD+[c] '''<=>''' 1 NADH[c] '''+''' 1 H+[c] '''+''' 1 butan-1-al[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[CHC_T00008517001_1]]
 
−
** [[pantograph]]-[[galdieria.sulphuraria]]
 
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* [[CHC_T00008477001]]
 
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** ORIGINAL_GENOME
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[CHC_T00008557001]]
 
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** ORIGINAL_GENOME
 
−
***AUTOMATED-NAME-MATCH
 
−
* [[CHC_T00008496001]]
 
−
** ORIGINAL_GENOME
 
−
***AUTOMATED-NAME-MATCH
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6519]], 8-amino-7-oxononanoate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6519 PWY-6519]
+
* [[PWY-7396]], butanol and isobutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7396 PWY-7396]
−
** '''7''' reactions found over '''11''' reactions in the full pathway
+
** '''5''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6883]], pyruvate fermentation to butanol II (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6883 PWY-6883]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6583]], pyruvate fermentation to butanol I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6583 PWY-6583]
 +
** '''7''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[gap-filling]]
−
** [[pantograph]]:
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[meneco]]
−
* [[annotation]]:
+
**** Comment: [[added for gapfilling]]
−
** [[pathwaytools]]:
+
−
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
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* RHEA:
−
{{#set: common name=3-oxoacyl-(acyl-carrier-protein) reductase}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33199 33199]
−
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] reductase}}
+
* LIGAND-RXN:
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{{#set: common name=beta-ketoacyl reductase}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03544 R03544]
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{{#set: ec number=EC-1.1.1.100}}
+
{{#set: direction=REVERSIBLE}}
−
{{#set: gene associated=CHC_T00008517001_1|CHC_T00008477001|CHC_T00008557001|CHC_T00008496001}}
+
{{#set: ec number=EC-1.1.1}}
−
{{#set: in pathway=PWY-6519}}
+
{{#set: in pathway=PWY-7396|PWY-6883|PWY-6583}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=gap-filling}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
+
{{#set: reconstruction tool=meneco}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=original_genome}}
+

Latest revision as of 17:05, 9 January 2019

Reaction RXN-161

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 butan-1-ol[c] + 1 NAD+[c] <=> 1 NADH[c] + 1 H+[c] + 1 butan-1-al[c]

Genes associated with this reaction

Pathways

  • PWY-7396, butanol and isobutanol biosynthesis (engineered): PWY-7396
    • 5 reactions found over 8 reactions in the full pathway
  • PWY-6883, pyruvate fermentation to butanol II (engineered): PWY-6883
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-6583, pyruvate fermentation to butanol I: PWY-6583
    • 7 reactions found over 8 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-161&oldid=22678"