Difference between revisions of "RXN-13697"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Lipopolysaccharides Lipopolysaccharides] == * common name: ** a lipopolysaccharide * Synonym(s)...")
 
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Lipopolysaccharides Lipopolysaccharides] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13697 RXN-13697] ==
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* direction:
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** REVERSIBLE
 
* common name:
 
* common name:
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** a lipopolysaccharide
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** Aspartate aminotransferase
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** probable aspartate aminotransferase
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** Aspartate transaminase
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** aspartate aminotransferase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.6.1.1 EC-2.6.1.1]
 
* Synonym(s):
 
* Synonym(s):
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** a lipopolysaccharide
 
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** lipopolysaccharide
 
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** LPS
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[2.4.1.56-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-ASPARTATE]][c] '''<=>''' 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[GLT]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 2-oxoglutarate[c] '''+''' 1 L-aspartate[c] '''<=>''' 1 oxaloacetate[c] '''+''' 1 L-glutamate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00006498001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00003344001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00008432001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00010197001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00010017001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00005085001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00009477001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00009477001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
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** '''7''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7115 PWY-7115]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=a lipopolysaccharide}}
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=a lipopolysaccharide|lipopolysaccharide|LPS}}
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{{#set: common name=Aspartate aminotransferase}}
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{{#set: consumed by=2.4.1.56-RXN}}
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{{#set: common name=probable aspartate aminotransferase}}
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{{#set: common name=Aspartate transaminase}}
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{{#set: common name=aspartate aminotransferase}}
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{{#set: ec number=EC-2.6.1.1}}
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{{#set: gene associated=CHC_T00006498001_1|CHC_T00003344001_1|CHC_T00008432001|CHC_T00010197001|CHC_T00010017001|CHC_T00005085001_1|CHC_T00009477001_1|CHC_T00009477001}}
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{{#set: in pathway=PWY-7117|PWY-7115}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 18:07, 9 January 2019

Reaction RXN-13697

  • direction:
    • REVERSIBLE
  • common name:
    • Aspartate aminotransferase
    • probable aspartate aminotransferase
    • Aspartate transaminase
    • aspartate aminotransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7117, C4 photosynthetic carbon assimilation cycle, PEPCK type: PWY-7117
    • 7 reactions found over 10 reactions in the full pathway
  • PWY-7115, C4 photosynthetic carbon assimilation cycle, NAD-ME type: PWY-7115
    • 7 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-13697&oldid=22716"