Difference between revisions of "CHOLINE-KINASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6524 RXN0-6524] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6524 RXN0-6524] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-KINASE-RXN CHOLINE-KINASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** Choline/ethanolamine kinase, putative
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.13.1 EC-3.1.13.1]
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** [http://enzyme.expasy.org/EC/2.7.1.32 EC-2.7.1.32]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[RNASE-II-POLY-A-SUBSTRATE-MRNA]][c] '''+''' n [[WATER]][c] '''=>''' n [[AMP]][c] '''+''' 1 [[RNASE-II-SUBSTRATE-WITH-NO-POLY-A-TAIL]][c]
+
** 1 [[CHOLINE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PHOSPHORYL-CHOLINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 RNase II poly-A substrate mRNA[c] '''+''' n H2O[c] '''=>''' n AMP[c] '''+''' 1 RNase II substrate with no poly-A tail[c]
+
** 1 choline[c] '''+''' 1 ATP[c] '''=>''' 1 phosphocholine[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00003097001_1]]
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* Gene: [[CHC_T00008383001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
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** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00008383001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7782]], plasmalogen biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7782 PWY-7782]
 +
** '''6''' reactions found over '''16''' reactions in the full pathway
 +
* [[PWY3O-450]], phosphatidylcholine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-450 PWY3O-450]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7818]], type IV lipoteichoic acid biosynthesis (S. pneumoniae): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7818 PWY-7818]
 +
** '''1''' reactions found over '''19''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12837 12837]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P20485 P20485]
 +
** [http://www.uniprot.org/uniprot/Q01134 Q01134]
 +
** [http://www.uniprot.org/uniprot/Q42809 Q42809]
 +
** [http://www.uniprot.org/uniprot/Q42810 Q42810]
 +
** [http://www.uniprot.org/uniprot/Q42811 Q42811]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01021 R01021]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-3.1.13.1}}
+
{{#set: common name=Choline/ethanolamine kinase, putative}}
−
{{#set: gene associated=CHC_T00003097001_1}}
+
{{#set: ec number=EC-2.7.1.32}}
−
{{#set: in pathway=}}
+
{{#set: gene associated=CHC_T00008383001_1|CHC_T00008383001}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=PWY-7782|PWY3O-450|PWY-7818}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
+
{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 17:11, 9 January 2019

Reaction CHOLINE-KINASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Choline/ethanolamine kinase, putative
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7782, plasmalogen biosynthesis: PWY-7782
    • 6 reactions found over 16 reactions in the full pathway
  • PWY3O-450, phosphatidylcholine biosynthesis I: PWY3O-450
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7818, type IV lipoteichoic acid biosynthesis (S. pneumoniae): PWY-7818
    • 1 reactions found over 19 reactions in the full pathway

Reconstruction information

External links





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