Difference between revisions of "RXN0-308"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-308 RXN0-308] == * direction: ** LEFT-TO-RIGHT * common name: ** cysteine desulfurase IscS, mi...") |
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** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
| − | |||
| − | |||
* [[PWY-6823]], molybdenum cofactor biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6823 PWY-6823] | * [[PWY-6823]], molybdenum cofactor biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6823 PWY-6823] | ||
** '''7''' reactions found over '''8''' reactions in the full pathway | ** '''7''' reactions found over '''8''' reactions in the full pathway | ||
| Line 38: | Line 36: | ||
* [[PWY-6892]], thiazole biosynthesis I (facultative anaerobic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6892 PWY-6892] | * [[PWY-6892]], thiazole biosynthesis I (facultative anaerobic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6892 PWY-6892] | ||
** '''3''' reactions found over '''7''' reactions in the full pathway | ** '''3''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[PWY0-1021]], L-alanine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1021 PWY0-1021] | ||
| + | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| − | |||
| − | |||
** Source: [[orthology-galdieria.sulphuraria]] | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 54: | Line 54: | ||
{{#set: ec number=EC-2.8.1.7}} | {{#set: ec number=EC-2.8.1.7}} | ||
{{#set: gene associated=CHC_T00009510001|CHC_T00000657001_1|CHC_T00009510001_1|CHC_T00008053001_1}} | {{#set: gene associated=CHC_T00009510001|CHC_T00000657001_1|CHC_T00009510001_1|CHC_T00008053001_1}} | ||
| − | {{#set: in pathway= | + | {{#set: in pathway=PWY-6823|PWY-6891|PWY-6892|PWY0-1021}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus | + | {{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 18:19, 9 January 2019
Contents
Reaction RXN0-308
- direction:
- LEFT-TO-RIGHT
- common name:
- cysteine desulfurase IscS, mitochondrial precursor
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 Cysteine-Desulfurase-L-cysteine[c] + 1 CYS[c] => 1 L-Cysteine-Desulfurase-persulfide[c] + 1 L-ALPHA-ALANINE[c]
- With common name(s):
- 1 an [L-cysteine desulfurase]-L-cysteine[c] + 1 L-cysteine[c] => 1 an [L-cysteine desulfurase] L-cysteine persulfide[c] + 1 L-alanine[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00009510001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00000657001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00009510001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00008053001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
Pathways
- PWY-6823, molybdenum cofactor biosynthesis: PWY-6823
- 7 reactions found over 8 reactions in the full pathway
- PWY-6891, thiazole biosynthesis II (aerobic bacteria): PWY-6891
- 3 reactions found over 7 reactions in the full pathway
- PWY-6892, thiazole biosynthesis I (facultative anaerobic bacteria): PWY-6892
- 3 reactions found over 7 reactions in the full pathway
- PWY0-1021, L-alanine biosynthesis III: PWY0-1021
- 1 reactions found over 1 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
External links
- LIGAND-RXN:
