Difference between revisions of "RXN-17114"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PROSTAGLANDIN-H2 PROSTAGLANDIN-H2] == * smiles: ** CCCCCC(O)C=CC2(C1(CC(OO1)C(CC=CCCCC(=O)[O-])...")
 
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PROSTAGLANDIN-H2 PROSTAGLANDIN-H2] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17114 RXN-17114] ==
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* smiles:
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* direction:
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** CCCCCC(O)C=CC2(C1(CC(OO1)C(CC=CCCCC(=O)[O-])2))
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** LEFT-TO-RIGHT
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* inchi key:
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* ec number:
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** InChIKey=YIBNHAJFJUQSRA-OZPHKNKMSA-M
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** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
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* common name:
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** prostaglandin-H2
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* molecular weight:
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** 351.462   
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* Synonym(s):
 
* Synonym(s):
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** (5Z, 13E)-(15S)-9α,11α-epidioxy-15-hydroxyprosta-5,13-dienoate
 
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** (5Z,13E)-(15S)-9α,11α-epidioxy-15-hydroxyprosta-5,13-dienoate
 
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** (5Z,9α,11α,13E,15S)-9,11-epidioxy-15-hydroxy-prosta-5,13-dienoate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[PROSTAGLANDIN-E-SYNTHASE-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[CPD-18492]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-18493]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 (2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 (3S)-hydroxy-(6Z,9Z,12Z,15Z,18Z)-tetracosapentaenoyl-CoA[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00009110001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00009190001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00009349001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00009422001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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== Pathways  ==
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* [[PWY-7726]], (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7726 PWY-7726]
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** '''4''' reactions found over '''13''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* CAS : 42935-17-1
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{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
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{{#set: ec number=EC-4.2.1.17}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25245222 25245222]
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{{#set: gene associated=CHC_T00009110001_1|CHC_T00009190001_1|CHC_T00009349001_1|CHC_T00009422001_1}}
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* CHEBI:
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{{#set: in pathway=PWY-7726}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=15554 15554]
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{{#set: reconstruction category=orthology}}
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* LIGAND-CPD:
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-ectocarpus_siliculosus}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00427 C00427]
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{{#set: reconstruction tool=pantograph}}
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* HMDB : HMDB01381
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{{#set: smiles=CCCCCC(O)C=CC2(C1(CC(OO1)C(CC=CCCCC(=O)[O-])2))}}
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{{#set: inchi key=InChIKey=YIBNHAJFJUQSRA-OZPHKNKMSA-M}}
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{{#set: common name=prostaglandin-H2}}
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{{#set: molecular weight=351.462    }}
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{{#set: common name=(5Z, 13E)-(15S)-9α,11α-epidioxy-15-hydroxyprosta-5,13-dienoate|(5Z,13E)-(15S)-9α,11α-epidioxy-15-hydroxyprosta-5,13-dienoate|(5Z,9α,11α,13E,15S)-9,11-epidioxy-15-hydroxy-prosta-5,13-dienoate}}
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{{#set: consumed by=PROSTAGLANDIN-E-SYNTHASE-RXN}}
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Latest revision as of 17:33, 9 January 2019

Reaction RXN-17114

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (2E,6Z,9Z,12Z,15Z,18Z)-tetracosahexaenoyl-CoA[c] + 1 H2O[c] => 1 (3S)-hydroxy-(6Z,9Z,12Z,15Z,18Z)-tetracosapentaenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7726, (4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis (6-desaturase): PWY-7726
    • 4 reactions found over 13 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-17114&oldid=23232"