Difference between revisions of "THREONINE--TRNA-LIGASE-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GLC-1-P GLC-1-P] == * smiles: ** C(O)C1(OC(OP(=O)([O-])[O-])C(O)C(O)C(O)1) * inchi key: ** InCh...")
 
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GLC-1-P GLC-1-P] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THREONINE--TRNA-LIGASE-RXN THREONINE--TRNA-LIGASE-RXN] ==
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* smiles:
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* direction:
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** C(O)C1(OC(OP(=O)([O-])[O-])C(O)C(O)C(O)1)
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=HXXFSFRBOHSIMQ-VFUOTHLCSA-L
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* common name:
 
* common name:
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** α-D-glucopyranose 1-phosphate
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** threonine--tRNA ligase, cytoplasmic
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* molecular weight:
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* ec number:
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** 258.121   
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** [http://enzyme.expasy.org/EC/6.1.1.3 EC-6.1.1.3]
 
* Synonym(s):
 
* Synonym(s):
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** glucose 1-phosphate
 
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** cori ester
 
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** D-glucose 1-phosphate
 
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** glucose-1P
 
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** α-glucose-1-phosphate
 
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** D-glucose-α-1-phosphate
 
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** α-D-glucose-1-P
 
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** D-glucose-1-phosphate
 
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** α-D-glucose 1-phosphate
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-16997]]
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* With identifiers:
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* [[GLUC1PADENYLTRANS-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[THR]][c] '''+''' 1 [[THR-tRNAs]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[Charged-THR-tRNAs]][c] '''+''' 1 [[AMP]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[RXN0-5182]]
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** 1 ATP[c] '''+''' 1 L-threonine[c] '''+''' 1 a tRNAthr[c] '''=>''' 1 diphosphate[c] '''+''' 1 an L-threonyl-[tRNAthr][c] '''+''' 1 AMP[c]
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* [[RXN-14353]]
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* [[RXN-9025]]
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== Genes associated with this reaction  ==
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* [[RXN-14285]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-14284]]
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* Gene: [[CHC_T00009393001_1]]
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* [[RXN-14286]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* [[RXN0-5184]]
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* Gene: [[CHC_T00008771001_1]]
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== Reaction(s) of unknown directionality ==
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** Source: [[orthology-galdieria.sulphuraria]]
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* [[PHOSPHOGLUCMUT-RXN]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* [[GLUC1PURIDYLTRANS-RXN]]
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* Gene: [[CHC_T00008771001]]
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* [[RXN-12171]]
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** Source: [[annotation-original_genome]]
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* [[GLYCOPHOSPHORYL-RXN]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* [[GALACTURIDYLYLTRANS-RXN]]
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== Pathways  ==
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* [[RXN-1826]]
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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* [[RXN-12392]]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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* [[GLYMALTOPHOSPHORYL-RXN]]
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 59-56-3
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* RHEA:
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* METABOLIGHTS : MTBLC58601
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24624 24624]
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* PUBCHEM:
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* UNIPROT:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=7091266 7091266]
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** [http://www.uniprot.org/uniprot/O83809 O83809]
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* HMDB : HMDB01586
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** [http://www.uniprot.org/uniprot/Q9JVA3 Q9JVA3]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P56071 P56071]
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** [http://www.genome.jp/dbget-bin/www_bget?C00103 C00103]
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** [http://www.uniprot.org/uniprot/O58430 O58430]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/P47615 P47615]
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** [http://www.chemspider.com/Chemical-Structure.5441206.html 5441206]
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** [http://www.uniprot.org/uniprot/O05947 O05947]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/Q9PIS3 Q9PIS3]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58601 58601]
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** [http://www.uniprot.org/uniprot/O67583 O67583]
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* BIGG : g1p
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** [http://www.uniprot.org/uniprot/O27504 O27504]
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{{#set: smiles=C(O)C1(OC(OP(=O)([O-])[O-])C(O)C(O)C(O)1)}}
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** [http://www.uniprot.org/uniprot/O51662 O51662]
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{{#set: inchi key=InChIKey=HXXFSFRBOHSIMQ-VFUOTHLCSA-L}}
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** [http://www.uniprot.org/uniprot/Q9ZMV3 Q9ZMV3]
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{{#set: common name=α-D-glucopyranose 1-phosphate}}
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** [http://www.uniprot.org/uniprot/Q9Z7A0 Q9Z7A0]
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{{#set: molecular weight=258.121    }}
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** [http://www.uniprot.org/uniprot/Q9WZJ9 Q9WZJ9]
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{{#set: common name=glucose 1-phosphate|cori ester|D-glucose 1-phosphate|glucose-1P|α-glucose-1-phosphate|D-glucose-α-1-phosphate|α-D-glucose-1-P|D-glucose-1-phosphate|α-D-glucose 1-phosphate}}
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** [http://www.uniprot.org/uniprot/Q9CED2 Q9CED2]
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{{#set: consumed by=RXN-16997|GLUC1PADENYLTRANS-RXN}}
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** [http://www.uniprot.org/uniprot/P43014 P43014]
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{{#set: produced by=RXN0-5182|RXN-14353|RXN-9025|RXN-14285|RXN-14284|RXN-14286|RXN0-5184}}
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** [http://www.uniprot.org/uniprot/P46244 P46244]
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{{#set: consumed or produced by=PHOSPHOGLUCMUT-RXN|GLUC1PURIDYLTRANS-RXN|RXN-12171|GLYCOPHOSPHORYL-RXN|GALACTURIDYLYLTRANS-RXN|RXN-1826|RXN-12392|GLYMALTOPHOSPHORYL-RXN}}
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** [http://www.uniprot.org/uniprot/P75225 P75225]
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** [http://www.uniprot.org/uniprot/Q48989 Q48989]
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** [http://www.uniprot.org/uniprot/P0A8M3 P0A8M3]
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** [http://www.uniprot.org/uniprot/O04630 O04630]
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** [http://www.uniprot.org/uniprot/P18255 P18255]
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** [http://www.uniprot.org/uniprot/P18256 P18256]
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** [http://www.uniprot.org/uniprot/P04801 P04801]
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** [http://www.uniprot.org/uniprot/P07236 P07236]
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** [http://www.uniprot.org/uniprot/P26639 P26639]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R03663 R03663]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=threonine--tRNA ligase, cytoplasmic}}
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{{#set: ec number=EC-6.1.1.3}}
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{{#set: gene associated=CHC_T00009393001_1|CHC_T00008771001_1|CHC_T00008771001}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 17:36, 9 January 2019

Reaction THREONINE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • threonine--tRNA ligase, cytoplasmic
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 L-threonine[c] + 1 a tRNAthr[c] => 1 diphosphate[c] + 1 an L-threonyl-[tRNAthr][c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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