Difference between revisions of "4OHBENZOATE-OCTAPRENYLTRANSFER-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11135 RXN-11135] == * direction: ** REVERSIBLE * common name: ** putative DNA helicase * ec num...")
 
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11135 RXN-11135] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4OHBENZOATE-OCTAPRENYLTRANSFER-RXN 4OHBENZOATE-OCTAPRENYLTRANSFER-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
−
* common name:
+
−
** putative DNA helicase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.6.4.12 EC-3.6.4.12]
+
** [http://enzyme.expasy.org/EC/2.5.1.39 EC-2.5.1.39]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[Double-helix-DNA]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[Unwound-DNA]][c]
+
** 1 [[OCTAPRENYL-DIPHOSPHATE]][c] '''+''' 1 [[4-hydroxybenzoate]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[3-OCTAPRENYL-4-HYDROXYBENZOATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 ATP[c] '''+''' 1 a double-helix DNA[c] '''<=>''' 1 H+[c] '''+''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 1 an unwound double-stranded DNA[c]
+
** 1 all-trans-octaprenyl diphosphate[c] '''+''' 1 4-hydroxybenzoate[c] '''=>''' 1 diphosphate[c] '''+''' 1 3-octaprenyl-4-hydroxybenzoate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00004316001_1]]
+
* Gene: [[CHC_T00003042001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
* [[CHC_T00010224001_1]]
+
* Gene: [[CHC_T00002263001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
* [[CHC_T00007861001_1]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00007327001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00009451001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00010267001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00010085001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-6708]], ubiquinol-8 biosynthesis (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6708 PWY-6708]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5870]], ubiquinol-8 biosynthesis (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5870 PWY-5870]
 +
** '''3''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
** [[pathwaytools]]:
+
*** Tool: [[pantograph]]
−
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
* RHEA:
−
{{#set: common name=putative DNA helicase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27782 27782]
−
{{#set: ec number=EC-3.6.4.12}}
+
* LIGAND-RXN:
−
{{#set: gene associated=CHC_T00004316001_1|CHC_T00010224001_1|CHC_T00007861001_1|CHC_T00007327001_1|CHC_T00009451001_1|CHC_T00010267001_1|CHC_T00010085001}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R05615 R05615]
−
{{#set: in pathway=}}
+
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: ec number=EC-2.5.1.39}}
 +
{{#set: gene associated=CHC_T00003042001_1|CHC_T00002263001_1}}
 +
{{#set: in pathway=PWY-6708|PWY-5870}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=original_genome}}
 

Latest revision as of 18:50, 9 January 2019

Reaction 4OHBENZOATE-OCTAPRENYLTRANSFER-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6708, ubiquinol-8 biosynthesis (prokaryotic): PWY-6708
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5870, ubiquinol-8 biosynthesis (eukaryotic): PWY-5870
    • 3 reactions found over 9 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=4OHBENZOATE-OCTAPRENYLTRANSFER-RXN&oldid=23571"