Difference between revisions of "ORNDECARBOX-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNDECARBOX-RXN ORNDECARBOX-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Ornithine decar...") |
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*** Assignment: AUTOMATED-NAME-MATCH | *** Assignment: AUTOMATED-NAME-MATCH | ||
== Pathways == | == Pathways == | ||
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* [[PWY-46]], putrescine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-46 PWY-46] | * [[PWY-46]], putrescine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-46 PWY-46] | ||
** '''1''' reactions found over '''1''' reactions in the full pathway | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
| + | * [[PWY-6305]], putrescine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6305 PWY-6305] | ||
| + | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[ORNDEG-PWY]], superpathway of ornithine degradation: [http://metacyc.org/META/NEW-IMAGE?object=ORNDEG-PWY ORNDEG-PWY] | ||
| + | ** '''2''' reactions found over '''6''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
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** Source: [[orthology-galdieria.sulphuraria]] | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
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* RHEA: | * RHEA: | ||
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22964 22964] | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22964 22964] | ||
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* UNIPROT: | * UNIPROT: | ||
** [http://www.uniprot.org/uniprot/P24169 P24169] | ** [http://www.uniprot.org/uniprot/P24169 P24169] | ||
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** [http://www.uniprot.org/uniprot/O69865 O69865] | ** [http://www.uniprot.org/uniprot/O69865 O69865] | ||
** [http://www.uniprot.org/uniprot/Q9UQW9 Q9UQW9] | ** [http://www.uniprot.org/uniprot/Q9UQW9 Q9UQW9] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R00670 R00670] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
{{#set: common name=Ornithine decarboxylase}} | {{#set: common name=Ornithine decarboxylase}} | ||
{{#set: ec number=EC-4.1.1.17}} | {{#set: ec number=EC-4.1.1.17}} | ||
{{#set: gene associated=CHC_T00010074001_1|CHC_T00010074001}} | {{#set: gene associated=CHC_T00010074001_1|CHC_T00010074001}} | ||
| − | {{#set: in pathway= | + | {{#set: in pathway=PWY-46|PWY-6305|ORNDEG-PWY}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus | + | {{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 17:58, 9 January 2019
Contents
Reaction ORNDECARBOX-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- Ornithine decarboxylase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 L-ORNITHINE[c] + 1 PROTON[c] => 1 PUTRESCINE[c] + 1 CARBON-DIOXIDE[c]
- With common name(s):
- 1 L-ornithine[c] + 1 H+[c] => 1 putrescine[c] + 1 CO2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00010074001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00010074001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
Pathways
- PWY-46, putrescine biosynthesis III: PWY-46
- 1 reactions found over 1 reactions in the full pathway
- PWY-6305, putrescine biosynthesis IV: PWY-6305
- 1 reactions found over 4 reactions in the full pathway
- ORNDEG-PWY, superpathway of ornithine degradation: ORNDEG-PWY
- 2 reactions found over 6 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
External links
- RHEA:
- UNIPROT:
- LIGAND-RXN:
