Difference between revisions of "THREO-DS-ISO-CITRATE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1321 RXN0-1321] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1321 RXN0-1321] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=THREO-DS-ISO-CITRATE THREO-DS-ISO-CITRATE] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(=O)(C(CC([O-])=O)C(O)C([O-])=O)[O-]
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/2.4.2.29 EC-2.4.2.29]
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** 189.101   
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* inchi key:
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** InChIKey=ODBLHEXUDAPZAU-ZAFYKAAXSA-K
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* common name:
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** D-threo-isocitrate
 
* Synonym(s):
 
* Synonym(s):
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** D-threo-isocitrate
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** (1R, 2S)-1-hydroxypropane-1,2,3-tricarboxylate
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** D-threo-isocitric acid
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** isocitric acid
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** isocitrate
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** threo-Ds-isocitrate
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** I-CIT
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** D-isocitrate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[biomass_rxn]]
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** 1 [[7-AMINOMETHYL-7-DEAZAGUANINE]][c] '''+''' 1 [[Guanine34-in-tRNAs]][c] '''=>''' 1 [[tRNA-with-7-aminomethyl-7-deazaguanine]][c] '''+''' 1 [[GUANINE]][c]
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* [[ISOCITRATE-DEHYDROGENASE-NAD+-RXN]]
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* With common name(s):
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== Reaction(s) known to produce the compound ==
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** 1 preQ1[c] '''+''' 1 a guanine34 in tRNA[c] '''=>''' 1 a 7-aminomethyl-7-deazaguanosine34 in tRNA[c] '''+''' 1 guanine[c]
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== Reaction(s) of unknown directionality ==
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* [[ISOCITDEH-RXN]]
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== Genes associated with this reaction  ==
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* [[RXN-9951]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[RXN-14047]]
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* [[CHC_T00008745001_1]]
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* [[ACONITATEHYDR-RXN]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00008743001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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== Pathways  ==
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* [[PWY-6700]], queuosine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6700 PWY-6700]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* KNAPSACK : C00001188
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** [http://www.genome.jp/dbget-bin/www_bget?R10209 R10209]
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* BIGG : icit
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{{#set: direction=LEFT-TO-RIGHT}}
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* CAS : 320-77-4
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{{#set: ec number=EC-2.4.2.29}}
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* CAS : 30810-51-6
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{{#set: gene associated=CHC_T00008745001_1|CHC_T00008743001_1}}
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* HMDB : HMDB01874
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{{#set: in pathway=PWY-6700}}
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* CHEMSPIDER:
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{{#set: reconstruction category=orthology}}
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** [http://www.chemspider.com/Chemical-Structure.4573553.html 4573553]
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{{#set: reconstruction tool=pantograph}}
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* CHEBI:
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{{#set: reconstruction source=galdieria.sulphuraria}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=15562 15562]
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* LIGAND-CPD:
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** [http://www.genome.jp/dbget-bin/www_bget?C00451 C00451]
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* PUBCHEM:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5459771 5459771]
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* METABOLIGHTS : MTBLC15562
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{{#set: smiles=C(=O)(C(CC([O-])=O)C(O)C([O-])=O)[O-]}}
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{{#set: molecular weight=189.101    }}
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{{#set: inchi key=InChIKey=ODBLHEXUDAPZAU-ZAFYKAAXSA-K}}
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{{#set: common name=D-threo-isocitrate}}
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{{#set: common name=D-threo-isocitrate|(1R, 2S)-1-hydroxypropane-1,2,3-tricarboxylate|D-threo-isocitric acid|isocitric acid|isocitrate|threo-Ds-isocitrate|I-CIT|D-isocitrate}}
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{{#set: consumed by=biomass_rxn|ISOCITRATE-DEHYDROGENASE-NAD+-RXN}}
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{{#set: reversible reaction associated=ISOCITDEH-RXN|RXN-9951|RXN-14047|ACONITATEHYDR-RXN}}

Latest revision as of 19:00, 9 January 2019

Metabolite THREO-DS-ISO-CITRATE

  • smiles:
    • C(=O)(C(CC([O-])=O)C(O)C([O-])=O)[O-]
  • molecular weight:
    • 189.101
  • inchi key:
    • InChIKey=ODBLHEXUDAPZAU-ZAFYKAAXSA-K
  • common name:
    • D-threo-isocitrate
  • Synonym(s):
    • D-threo-isocitrate
    • (1R, 2S)-1-hydroxypropane-1,2,3-tricarboxylate
    • D-threo-isocitric acid
    • isocitric acid
    • isocitrate
    • threo-Ds-isocitrate
    • I-CIT
    • D-isocitrate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • KNAPSACK : C00001188
  • BIGG : icit
  • CAS : 320-77-4
  • CAS : 30810-51-6
  • HMDB : HMDB01874
  • CHEMSPIDER:
  • CHEBI:
  • LIGAND-CPD:
  • PUBCHEM:
  • METABOLIGHTS : MTBLC15562
"C(=O)(C(CC([O-])=O)C(O)C([O-])=O)[O-" cannot be used as a page name in this wiki.




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