Difference between revisions of "RXN0-884"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-884 RXN0-884] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....") |
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== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 2 [[ | + | ** 2 [[Reduced-ferredoxins]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[HYDROXY-METHYL-BUTENYL-DIP]][c] '''=>''' 2 [[Oxidized-ferredoxins]][c] '''+''' 1 [[CPD-4211]][c] '''+''' 1 [[WATER]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 2 H+[c] '''+''' 1 (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate[c] ''' | + | ** 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 2 H+[c] '''+''' 1 (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate[c] '''=>''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 1 dimethylallyl diphosphate[c] '''+''' 1 H2O[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| Line 19: | Line 19: | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
| − | |||
| − | |||
* [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560] | * [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560] | ||
** '''8''' reactions found over '''9''' reactions in the full pathway | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY] | ||
| + | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| − | |||
| − | |||
** Source: [[orthology-galdieria.sulphuraria]] | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| Line 36: | Line 36: | ||
{{#set: ec number=EC-1.17.7.4}} | {{#set: ec number=EC-1.17.7.4}} | ||
{{#set: gene associated=CHC_T00008841001_1}} | {{#set: gene associated=CHC_T00008841001_1}} | ||
| − | {{#set: in pathway= | + | {{#set: in pathway=PWY-7560|NONMEVIPP-PWY}} |
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 18:02, 9 January 2019
Contents
Reaction RXN0-884
- direction:
- LEFT-TO-RIGHT
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 2 Reduced-ferredoxins[c] + 2 PROTON[c] + 1 HYDROXY-METHYL-BUTENYL-DIP[c] => 2 Oxidized-ferredoxins[c] + 1 CPD-4211[c] + 1 WATER[c]
- With common name(s):
- 2 a reduced ferredoxin [iron-sulfur] cluster[c] + 2 H+[c] + 1 (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate[c] => 2 an oxidized ferredoxin [iron-sulfur] cluster[c] + 1 dimethylallyl diphosphate[c] + 1 H2O[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00008841001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
Pathways
- PWY-7560, methylerythritol phosphate pathway II: PWY-7560
- 8 reactions found over 9 reactions in the full pathway
- NONMEVIPP-PWY, methylerythritol phosphate pathway I: NONMEVIPP-PWY
- 7 reactions found over 9 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
External links
