Difference between revisions of "CHC T00005827001 1"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6035 PWY-6035] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.39-RXN 1.1.1.39-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6035 PWY-6035] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.1.1.39-RXN 1.1.1.39-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** LEFT-TO-RIGHT
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* common name:
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* ec number:
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** 2,3-cis-flavanols biosynthesis
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** [http://enzyme.expasy.org/EC/1.1.1.38 EC-1.1.1.38]
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** [http://enzyme.expasy.org/EC/1.1.1.39 EC-1.1.1.39]
 
* Synonym(s):
 
* Synonym(s):
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** 2,3-cis-flavan-3-ols biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''1''' reaction(s) found
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* With identifiers:
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** [[RXN-9725]]
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** 1 [[MAL]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PYRUVATE]][c]
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== Reaction(s) not found ==
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* With common name(s):
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* '''2''' reaction(s) not found
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** 1 (S)-malate[c] '''+''' 1 NAD+[c] '''=>''' 1 NADH[c] '''+''' 1 CO2[c] '''+''' 1 pyruvate[c]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-9723 RXN-9723]
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-9724 RXN-9724]
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== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[CHC_T00008878001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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== Pathways  ==
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* [[PWY-3641]], L-carnitine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3641 PWY-3641]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
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** '''12''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7384 PWY-7384]
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** '''5''' reactions found over '''12''' reactions in the full pathway
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* [[PWY-7686]], L-malate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7686 PWY-7686]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-7115]], C4 photosynthetic carbon assimilation cycle, NAD-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7115 PWY-7115]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7118]], chitin degradation to ethanol: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7118 PWY-7118]
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** '''4''' reactions found over '''6''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[galdieria.sulphuraria]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-33090}}
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* RHEA:
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{{#set: common name=2,3-cis-flavanols biosynthesis}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12653 12653]
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{{#set: common name=2,3-cis-flavan-3-ols biosynthesis}}
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* LIGAND-RXN:
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{{#set: reaction found=1}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00214 R00214]
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{{#set: reaction not found=2}}
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q48662 Q48662]
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** [http://www.uniprot.org/uniprot/Q9PN12 Q9PN12]
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** [http://www.uniprot.org/uniprot/O59029 O59029]
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** [http://www.uniprot.org/uniprot/P16468 P16468]
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** [http://www.uniprot.org/uniprot/Q9CGB2 Q9CGB2]
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** [http://www.uniprot.org/uniprot/P26616 P26616]
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** [http://www.uniprot.org/uniprot/Q9JVE6 Q9JVE6]
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** [http://www.uniprot.org/uniprot/P37224 P37224]
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** [http://www.uniprot.org/uniprot/P37225 P37225]
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** [http://www.uniprot.org/uniprot/P37221 P37221]
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** [http://www.uniprot.org/uniprot/Q7M1T9 Q7M1T9]
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** [http://www.uniprot.org/uniprot/Q9M162 Q9M162]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-1.1.1.38}}
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{{#set: ec number=EC-1.1.1.39}}
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{{#set: gene associated=CHC_T00008878001_1}}
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{{#set: in pathway=PWY-3641|GLUCONEO-PWY|PWY-7384|PWY-7686|PWY-7115|PWY-7118}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}

Revision as of 10:47, 18 January 2018

Reaction 1.1.1.39-RXN

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (S)-malate[c] + 1 NAD+[c] => 1 NADH[c] + 1 CO2[c] + 1 pyruvate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-3641, L-carnitine degradation III: PWY-3641
    • 2 reactions found over 3 reactions in the full pathway
  • GLUCONEO-PWY, gluconeogenesis I: GLUCONEO-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • PWY-7384, anaerobic energy metabolism (invertebrates, mitochondrial): PWY-7384
    • 5 reactions found over 12 reactions in the full pathway
  • PWY-7686, L-malate degradation II: PWY-7686
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-7115, C4 photosynthetic carbon assimilation cycle, NAD-ME type: PWY-7115
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-7118, chitin degradation to ethanol: PWY-7118
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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