Difference between revisions of "CPD-18348"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-CINNAMATE-4-MONOOXYGENASE-RXN TRANS-CINNAMATE-4-MONOOXYGENASE-RXN] == * direction: ** LEFT-TO...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13163 RXN-13163] == * direction: ** REVERSIBLE * common name: ** 3-isopropylmalate dehydratase...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-CINNAMATE-4-MONOOXYGENASE-RXN TRANS-CINNAMATE-4-MONOOXYGENASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13163 RXN-13163] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 +
* common name:
 +
** 3-isopropylmalate dehydratase small subunit
 +
** 3-isopropylmalate dehydratase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.14.13.11 EC-1.14.13.11]
+
** [http://enzyme.expasy.org/EC/4.2.1.33 EC-4.2.1.33]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NADPH]][c] '''+''' 1 [[CPD-674]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[COUMARATE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NADP]][c]
+
** 1 [[2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE]][c] '''<=>''' 1 [[3-CARBOXY-3-HYDROXY-ISOCAPROATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NADPH[c] '''+''' 1 trans-cinnamate[c] '''+''' 1 oxygen[c] '''+''' 1 H+[c] '''=>''' 1 4-coumarate[c] '''+''' 1 H2O[c] '''+''' 1 NADP+[c]
+
** 1 (2R,3S)-3-isopropylmalate[c] '''<=>''' 1 (2S)-2-isopropylmalate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00009062001_1]]
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* [[CHC_T00009087001]]
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** [[pantograph]]-[[a.taliana]]
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** ORIGINAL_GENOME
−
* [[CHC_T00008616001_1]]
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***AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[a.taliana]]
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* [[CHC_T00009087001_1]]
−
* [[CHC_T00009499001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
−
** [[pantograph]]-[[a.taliana]]
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* [[CHC_T00009184001]]
−
* [[CHC_T00010245001_1]]
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** ORIGINAL_GENOME
−
** [[pantograph]]-[[a.taliana]]
+
***AUTOMATED-NAME-MATCH
−
* [[CHC_T00008663001_1]]
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* [[CHC_T00009184001_1]]
−
** [[pantograph]]-[[a.taliana]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
−
* [[CHC_T00008813001_1]]
+
−
** [[pantograph]]-[[a.taliana]]
+
−
* [[CHC_T00010004001_1]]
+
−
** [[pantograph]]-[[a.taliana]]
+
−
* [[CHC_T00009131001_1]]
+
−
** [[pantograph]]-[[a.taliana]]
+
−
* [[CHC_T00008672001_1]]
+
−
** [[pantograph]]-[[a.taliana]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY1F-467]], phenylpropanoid biosynthesis, initial reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-467 PWY1F-467]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
 
−
** '''7''' reactions found over '''19''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
−
*** [[a.taliana]]
+
*** [[galdieria.sulphuraria]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[original_genome]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10608 10608]
+
{{#set: common name=3-isopropylmalate dehydratase small subunit}}
−
* LIGAND-RXN:
+
{{#set: common name=3-isopropylmalate dehydratase}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02253 R02253]
+
{{#set: ec number=EC-4.2.1.33}}
−
* UNIPROT:
+
{{#set: gene associated=CHC_T00009087001|CHC_T00009087001_1|CHC_T00009184001|CHC_T00009184001_1}}
−
** [http://www.uniprot.org/uniprot/Q04468 Q04468]
+
{{#set: in pathway=}}
−
** [http://www.uniprot.org/uniprot/P37115 P37115]
+
−
** [http://www.uniprot.org/uniprot/Q9S8R8 Q9S8R8]
+
−
** [http://www.uniprot.org/uniprot/P48522 P48522]
+
−
** [http://www.uniprot.org/uniprot/Q42895 Q42895]
+
−
** [http://www.uniprot.org/uniprot/O81928 O81928]
+
−
** [http://www.uniprot.org/uniprot/O24315 O24315]
+
−
** [http://www.uniprot.org/uniprot/Q43033 Q43033]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: ec number=EC-1.14.13.11}}
+
−
{{#set: gene associated=CHC_T00009062001_1|CHC_T00008616001_1|CHC_T00009499001_1|CHC_T00010245001_1|CHC_T00008663001_1|CHC_T00008813001_1|CHC_T00010004001_1|CHC_T00009131001_1|CHC_T00008672001_1}}
+
−
{{#set: in pathway=PWY1F-467|PWY-1121}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=a.taliana}}
+
{{#set: reconstruction source=galdieria.sulphuraria}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=original_genome}}

Revision as of 11:49, 18 January 2018

Reaction RXN-13163

  • direction:
    • REVERSIBLE
  • common name:
    • 3-isopropylmalate dehydratase small subunit
    • 3-isopropylmalate dehydratase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CPD-18348&oldid=4822"