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| − | [[Category:Reaction]] | + | [[Category:Metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ISOCITRATE-DEHYDROGENASE-NAD+-RXN ISOCITRATE-DEHYDROGENASE-NAD+-RXN] == | + | == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Uracil16-in-tRNAs Uracil16-in-tRNAs] == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| | * common name: | | * common name: |
| − | ** Isocitrate dehydrogenase, NAD-dependent | + | ** a uracil16 in tRNA |
| − | ** isocitrate dehydrogenase (NAD+) subunit 2, mitochondrial precursor
| + | |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/1.1.1.286 EC-1.1.1.286]
| + | |
| − | ** [http://enzyme.expasy.org/EC/1.1.1.41 EC-1.1.1.41]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reaction(s) known to consume the compound == |
| − | * With identifiers:
| + | * [[RXN-12454]] |
| − | ** 1 [[THREO-DS-ISO-CITRATE]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
| + | == Reaction(s) known to produce the compound == |
| − | * With common name(s):
| + | == Reaction(s) of unknown directionality == |
| − | ** 1 D-threo-isocitrate[c] '''+''' 1 NAD+[c] '''=>''' 1 2-oxoglutarate[c] '''+''' 1 NADH[c] '''+''' 1 CO2[c]
| + | |
| − | | + | |
| − | == Genes associated with this reaction == | + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[CHC_T00008852001_1]] | + | |
| − | ** [[pantograph]]-[[galdieria.sulphuraria]]
| + | |
| − | * [[CHC_T00009293001_1]]
| + | |
| − | ** [[pantograph]]-[[galdieria.sulphuraria]]
| + | |
| − | * [[CHC_T00008852001]]
| + | |
| − | ** ORIGINAL_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[CHC_T00009293001]]
| + | |
| − | ** ORIGINAL_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[CHC_T00009162001]]
| + | |
| − | ** ORIGINAL_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[CHC_T00009162001_1]]
| + | |
| − | ** [[pantograph]]-[[galdieria.sulphuraria]]
| + | |
| − | == Pathways == | + | |
| − | * [[PWY-5690]], TCA cycle II (plants and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5690 PWY-5690]
| + | |
| − | ** '''9''' reactions found over '''9''' reactions in the full pathway
| + | |
| − | * [[PWY66-398]], TCA cycle III (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398]
| + | |
| − | ** '''10''' reactions found over '''11''' reactions in the full pathway
| + | |
| − | * [[PWY-6549]], L-glutamine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6549 PWY-6549]
| + | |
| − | ** '''9''' reactions found over '''9''' reactions in the full pathway
| + | |
| − | == Reconstruction information == | + | |
| − | * [[orthology]]:
| + | |
| − | ** [[pantograph]]:
| + | |
| − | *** [[galdieria.sulphuraria]]
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[original_genome]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: common name=a uracil16 in tRNA}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23632 23632]
| + | {{#set: consumed by=RXN-12454}} |
| − | * LIGAND-RXN:
| + | |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R00709 R00709]
| + | |
| − | * UNIPROT:
| + | |
| − | ** [http://www.uniprot.org/uniprot/P56472 P56472]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P41566 P41566]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P28834 P28834]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P41565 P41565]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P41564 P41564]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P50213 P50213]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q7M3F1 Q7M3F1]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P41563 P41563]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q28479 Q28479]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q28480 Q28480]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O65852 O65852]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O65501 O65501]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O82004 O82004]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O43837 O43837]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O13696 O13696]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9USP8 Q9USP8]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}}
| + | |
| − | {{#set: common name=Isocitrate dehydrogenase, NAD-dependent}} | + | |
| − | {{#set: common name=isocitrate dehydrogenase (NAD+) subunit 2, mitochondrial precursor}} | + | |
| − | {{#set: ec number=EC-1.1.1.286}}
| + | |
| − | {{#set: ec number=EC-1.1.1.41}}
| + | |
| − | {{#set: gene associated=CHC_T00008852001_1|CHC_T00009293001_1|CHC_T00008852001|CHC_T00009293001|CHC_T00009162001|CHC_T00009162001_1}}
| + | |
| − | {{#set: in pathway=PWY-5690|PWY66-398|PWY-6549}}
| + | |
| − | {{#set: reconstruction category=orthology}}
| + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
| − | {{#set: reconstruction source=galdieria.sulphuraria}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=original_genome}}
| + | |
