Difference between revisions of "PWY-7807"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPGLUCEPIM-RXN UDPGLUCEPIM-RXN] == * direction: ** REVERSIBLE * common name: ** UDP-glucose 4-epim...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12400 RXN-12400] == * direction: ** LEFT-TO-RIGHT * common name: ** xyloglucan XLLG oligosaccha...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPGLUCEPIM-RXN UDPGLUCEPIM-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12400 RXN-12400] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** UDP-glucose 4-epimerase
+
** xyloglucan XLLG oligosaccharide β-galactosidase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/5.1.3.2 EC-5.1.3.2]
+
** [http://enzyme.expasy.org/EC/3.2.1.23 EC-3.2.1.23]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-12575]][c] '''<=>''' 1 [[CPD-14553]][c]
+
** 2 [[WATER]][c] '''+''' 1 [[CPD-13378]][c] '''=>''' 2 [[D-galactopyranose]][c] '''+''' 1 [[CPD-13375]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 UDP-&alpha;-D-glucose[c] '''<=>''' 1 UDP-&alpha;-D-galactose[c]
+
** 2 H2O[c] '''+''' 1 XLLG xyloglucan oligosaccharide[c] '''=>''' 2 D-galactopyranose[c] '''+''' 1 XXXG xyloglucan oligosaccharide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00006828001_1]]
+
* [[CHC_T00008606001_1]]
−
** [[pantograph]]-[[a.taliana]]
+
** [[pantograph]]-[[galdieria.sulphuraria]]
−
* [[CHC_T00009498001_1]]
+
* [[CHC_T00008905001_1]]
 
** [[pantograph]]-[[galdieria.sulphuraria]]
 
** [[pantograph]]-[[galdieria.sulphuraria]]
−
** [[pantograph]]-[[a.taliana]]
 
−
* [[CHC_T00007304001_1]]
 
−
** [[pantograph]]-[[a.taliana]]
 
−
* [[CHC_T00009498001]]
 
−
** ORIGINAL_GENOME
 
−
***AUTOMATED-NAME-MATCH
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7344]], UDP-D-galactose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7344 PWY-7344]
+
* [[PWY-6807]], xyloglucan degradation II (exoglucanase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6807 PWY-6807]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-6397]], mycolyl-arabinogalactan-peptidoglycan complex biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6397 PWY-6397]
+
−
** '''1''' reactions found over '''17''' reactions in the full pathway
+
−
* [[COLANSYN-PWY]], colanic acid building blocks biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=COLANSYN-PWY COLANSYN-PWY]
+
−
** '''5''' reactions found over '''11''' reactions in the full pathway
+
−
* [[PWY-6527]], stachyose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6527 PWY-6527]
+
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-7328]], superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7328 PWY-7328]
+
−
** '''4''' reactions found over '''10''' reactions in the full pathway
+
−
* [[PWY-6317]], D-galactose degradation I (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6317 PWY-6317]
+
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
−
* [[PWY66-422]], D-galactose degradation V (Leloir pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-422 PWY66-422]
+
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
−
* [[PWY-3821]], D-galactose degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3821 PWY-3821]
+
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 
*** [[galdieria.sulphuraria]]
 
*** [[galdieria.sulphuraria]]
−
*** [[a.taliana]]
 
−
* [[annotation]]:
 
−
** [[pathwaytools]]:
 
−
*** [[original_genome]]
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22168 22168]
+
{{#set: common name=xyloglucan XLLG oligosaccharide &beta;-galactosidase}}
−
* LIGAND-RXN:
+
{{#set: ec number=EC-3.2.1.23}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00291 R00291]
+
{{#set: gene associated=CHC_T00008606001_1|CHC_T00008905001_1}}
−
* UNIPROT:
+
{{#set: in pathway=PWY-6807}}
−
** [http://www.uniprot.org/uniprot/P35673 P35673]
+
−
** [http://www.uniprot.org/uniprot/P22715 P22715]
+
−
** [http://www.uniprot.org/uniprot/P21977 P21977]
+
−
** [http://www.uniprot.org/uniprot/P24325 P24325]
+
−
** [http://www.uniprot.org/uniprot/Q9CE66 Q9CE66]
+
−
** [http://www.uniprot.org/uniprot/Q57664 Q57664]
+
−
** [http://www.uniprot.org/uniprot/P55180 P55180]
+
−
** [http://www.uniprot.org/uniprot/Q9PNG3 Q9PNG3]
+
−
** [http://www.uniprot.org/uniprot/P56997 P56997]
+
−
** [http://www.uniprot.org/uniprot/Q59083 Q59083]
+
−
** [http://www.uniprot.org/uniprot/Q44016 Q44016]
+
−
** [http://www.uniprot.org/uniprot/Q45291 Q45291]
+
−
** [http://www.uniprot.org/uniprot/P96995 P96995]
+
−
** [http://www.uniprot.org/uniprot/P45602 P45602]
+
−
** [http://www.uniprot.org/uniprot/P18645 P18645]
+
−
** [http://www.uniprot.org/uniprot/P26503 P26503]
+
−
** [http://www.uniprot.org/uniprot/P40801 P40801]
+
−
** [http://www.uniprot.org/uniprot/Q05026 Q05026]
+
−
** [http://www.uniprot.org/uniprot/P56985 P56985]
+
−
** [http://www.uniprot.org/uniprot/Q51148 Q51148]
+
−
** [http://www.uniprot.org/uniprot/Q56093 Q56093]
+
−
** [http://www.uniprot.org/uniprot/Q42605 Q42605]
+
−
** [http://www.uniprot.org/uniprot/Q60109 Q60109]
+
−
** [http://www.uniprot.org/uniprot/P72903 P72903]
+
−
** [http://www.uniprot.org/uniprot/P72915 P72915]
+
−
** [http://www.uniprot.org/uniprot/O66256 O66256]
+
−
** [http://www.uniprot.org/uniprot/O64749 O64749]
+
−
** [http://www.uniprot.org/uniprot/Q9SN58 Q9SN58]
+
−
** [http://www.uniprot.org/uniprot/Q8VZ26 Q8VZ26]
+
−
** [http://www.uniprot.org/uniprot/Q43070 Q43070]
+
−
** [http://www.uniprot.org/uniprot/Q9T0A7 Q9T0A7]
+
−
** [http://www.uniprot.org/uniprot/O65780 O65780]
+
−
** [http://www.uniprot.org/uniprot/O65781 O65781]
+
−
** [http://www.uniprot.org/uniprot/Q9RMC0 Q9RMC0]
+
−
** [http://www.uniprot.org/uniprot/P04397 P04397]
+
−
** [http://www.uniprot.org/uniprot/P09147 P09147]
+
−
** [http://www.uniprot.org/uniprot/P13226 P13226]
+
−
** [http://www.uniprot.org/uniprot/P09609 P09609]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=UDP-glucose 4-epimerase}}
+
−
{{#set: ec number=EC-5.1.3.2}}
+
−
{{#set: gene associated=CHC_T00006828001_1|CHC_T00009498001_1|CHC_T00007304001_1|CHC_T00009498001}}
+
−
{{#set: in pathway=PWY-7344|PWY-6397|COLANSYN-PWY|PWY-6527|PWY-7328|PWY-6317|PWY66-422|PWY-3821}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
+
{{#set: reconstruction source=galdieria.sulphuraria}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=original_genome}}
+

Revision as of 10:50, 18 January 2018

Reaction RXN-12400

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • xyloglucan XLLG oligosaccharide β-galactosidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 2 H2O[c] + 1 XLLG xyloglucan oligosaccharide[c] => 2 D-galactopyranose[c] + 1 XXXG xyloglucan oligosaccharide[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6807, xyloglucan degradation II (exoglucanase): PWY-6807
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-7807&oldid=4951"