Difference between revisions of "1.6.5.4-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5176 PWY-5176] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-33...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCSEMIALDDEHYDROG-RXN SUCCSEMIALDDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5176 PWY-5176] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCSEMIALDDEHYDROG-RXN SUCCSEMIALDDEHYDROG-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3398 TAX-3398]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** coumarin biosynthesis (via 2-coumarate)
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** succinic semialdehyde dehydrogenase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.2.1.79 EC-1.2.1.79]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''1''' reaction(s) found
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* With identifiers:
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** [[RXN-8036]]
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** 1 [[SUCC-S-ALD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NADP]][c] '''=>''' 1 [[NADPH]][c] '''+''' 1 [[SUC]][c] '''+''' 2 [[PROTON]][c]
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== Reaction(s) not found ==
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* With common name(s):
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* '''4''' reaction(s) not found
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** 1 succinate semialdehyde[c] '''+''' 1 H2O[c] '''+''' 1 NADP+[c] '''=>''' 1 NADPH[c] '''+''' 1 succinate[c] '''+''' 2 H+[c]
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** [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.114-RXN 2.4.1.114-RXN]
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** [http://metacyc.org/META/NEW-IMAGE?object=TRANS-CINNAMATE-2-MONOOXYGENASE-RXN TRANS-CINNAMATE-2-MONOOXYGENASE-RXN]
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== Genes associated with this reaction ==
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-8035 RXN-8035]
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Genes have been associated with this reaction based on different elements listed below.
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** [http://metacyc.org/META/NEW-IMAGE?object=RXN-8037 RXN-8037]
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* [[CHC_T00008575001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-6537]], 4-aminobutanoate degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6537 PWY-6537]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[3-HYDROXYPHENYLACETATE-DEGRADATION-PWY]], 4-hydroxyphenylacetate degradation: [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYPHENYLACETATE-DEGRADATION-PWY 3-HYDROXYPHENYLACETATE-DEGRADATION-PWY]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-6993]], nicotine degradation II (pyrrolidine pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6993 PWY-6993]
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** '''2''' reactions found over '''11''' reactions in the full pathway
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* [[P105-PWY]], TCA cycle IV (2-oxoglutarate decarboxylase): [http://metacyc.org/META/NEW-IMAGE?object=P105-PWY P105-PWY]
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** '''8''' reactions found over '''11''' reactions in the full pathway
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* [[P181-PWY]], nicotine degradation I (pyridine pathway): [http://metacyc.org/META/NEW-IMAGE?object=P181-PWY P181-PWY]
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** '''1''' reactions found over '''17''' reactions in the full pathway
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== Reconstruction information  ==
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
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*** [[original_genome]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-3398}}
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* RHEA:
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{{#set: common name=coumarin biosynthesis (via 2-coumarate)}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13213 13213]
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{{#set: reaction found=1}}
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* LIGAND-RXN:
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{{#set: reaction not found=4}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00714 R00714]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q9JTN7 Q9JTN7]
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** [http://www.uniprot.org/uniprot/P25526 P25526]
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** [http://www.uniprot.org/uniprot/O85997 O85997]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=succinic semialdehyde dehydrogenase}}
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{{#set: ec number=EC-1.2.1.79}}
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{{#set: gene associated=CHC_T00008575001}}
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{{#set: in pathway=PWY-6537|3-HYDROXYPHENYLACETATE-DEGRADATION-PWY|PWY-6993|P105-PWY|P181-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}

Revision as of 11:50, 18 January 2018

Reaction SUCCSEMIALDDEHYDROG-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • succinic semialdehyde dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 succinate semialdehyde[c] + 1 H2O[c] + 1 NADP+[c] => 1 NADPH[c] + 1 succinate[c] + 2 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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