Difference between revisions of "RXN-12457"

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(Created page with "Category:Gene == Gene CHC_T00008793001 == * left end position: ** 128261 * transcription direction: ** POSITIVE * right end position: ** 130840 * centisome position: ** 50...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOASYN-RXN ACYLCOASYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 2,3,4-saturated f...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene CHC_T00008793001 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOASYN-RXN ACYLCOASYN-RXN] ==
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* left end position:
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* direction:
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** 128261
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** 2,3,4-saturated fatty acyl-CoA synthetase
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* right end position:
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** long-chain-fatty-acid-CoA ligase
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** 130840
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
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** 50.823   
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* Synonym(s):
 
* Synonym(s):
 +
** Acyl-activating enzyme
 +
** Fatty acid thiokinase (long-chain)
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[PROTEIN-KINASE-RXN]]
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* With identifiers:
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** original_genome
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** 1 [[CPD66-39]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 a 2,3,4-saturated fatty acid[c] '''+''' 1 ATP[c] '''+''' 1 coenzyme A[c] '''=>''' 1 a 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
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* [[CHC_T00008160001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00008811001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00009428001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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* [[CHC_T00009428001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00008500001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00008811001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
 +
== Pathways ==
 +
* [[PWY-5136]], fatty acid β-oxidation II (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7288]], fatty acid β-oxidation (peroxisome, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7288 PWY-7288]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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* [[FAO-PWY]], fatty acid β-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWY66-391]], fatty acid β-oxidation VI (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-391 PWY66-391]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
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*** [[original_genome]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=128261}}
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* UNIPROT:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.uniprot.org/uniprot/P18163 P18163]
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{{#set: right end position=130840}}
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** [http://www.uniprot.org/uniprot/P39518 P39518]
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{{#set: centisome position=50.823    }}
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** [http://www.uniprot.org/uniprot/O51162 O51162]
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{{#set: reaction associated=PROTEIN-KINASE-RXN}}
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** [http://www.uniprot.org/uniprot/P39002 P39002]
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** [http://www.uniprot.org/uniprot/Q9RYK3 Q9RYK3]
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** [http://www.uniprot.org/uniprot/Q10776 Q10776]
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** [http://www.uniprot.org/uniprot/O83181 O83181]
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** [http://www.uniprot.org/uniprot/Q9RTR4 Q9RTR4]
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** [http://www.uniprot.org/uniprot/P94547 P94547]
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** [http://www.uniprot.org/uniprot/Q9YCF0 Q9YCF0]
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** [http://www.uniprot.org/uniprot/Q9CHR0 Q9CHR0]
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** [http://www.uniprot.org/uniprot/Q9JTK0 Q9JTK0]
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** [http://www.uniprot.org/uniprot/P44446 P44446]
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** [http://www.uniprot.org/uniprot/O30039 O30039]
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** [http://www.uniprot.org/uniprot/O51539 O51539]
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** [http://www.uniprot.org/uniprot/Q9JYJ7 Q9JYJ7]
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** [http://www.uniprot.org/uniprot/P33121 P33121]
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** [http://www.uniprot.org/uniprot/P33124 P33124]
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** [http://www.uniprot.org/uniprot/P30624 P30624]
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** [http://www.uniprot.org/uniprot/Q02602 Q02602]
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** [http://www.uniprot.org/uniprot/P69451 P69451]
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** [http://www.uniprot.org/uniprot/P69452 P69452]
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** [http://www.uniprot.org/uniprot/Q8JZR0 Q8JZR0]
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** [http://www.uniprot.org/uniprot/P47912 P47912]
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** [http://www.uniprot.org/uniprot/P73004 P73004]
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** [http://www.uniprot.org/uniprot/O81614 O81614]
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** [http://www.uniprot.org/uniprot/O15840 O15840]
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** [http://www.uniprot.org/uniprot/Q96537 Q96537]
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** [http://www.uniprot.org/uniprot/Q96538 Q96538]
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** [http://www.uniprot.org/uniprot/Q96338 Q96338]
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** [http://www.uniprot.org/uniprot/Q9T009 Q9T009]
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** [http://www.uniprot.org/uniprot/Q9T0A0 Q9T0A0]
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** [http://www.uniprot.org/uniprot/Q9ZBW6 Q9ZBW6]
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** [http://www.uniprot.org/uniprot/Q9X7Y5 Q9X7Y5]
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** [http://www.uniprot.org/uniprot/Q9X7Z0 Q9X7Z0]
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** [http://www.uniprot.org/uniprot/O60135 O60135]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=2,3,4-saturated fatty acyl-CoA synthetase}}
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{{#set: common name=long-chain-fatty-acid-CoA ligase}}
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{{#set: ec number=EC-6.2.1.3}}
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{{#set: common name=Acyl-activating enzyme|Fatty acid thiokinase (long-chain)}}
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{{#set: gene associated=CHC_T00008160001_1|CHC_T00008811001_1|CHC_T00009428001|CHC_T00009428001_1|CHC_T00008500001_1|CHC_T00008811001}}
 +
{{#set: in pathway=PWY-5136|PWY-7288|FAO-PWY|PWY66-391}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}

Revision as of 10:55, 18 January 2018

Reaction ACYLCOASYN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 2,3,4-saturated fatty acyl-CoA synthetase
    • long-chain-fatty-acid-CoA ligase
  • ec number:
  • Synonym(s):
    • Acyl-activating enzyme
    • Fatty acid thiokinase (long-chain)

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a 2,3,4-saturated fatty acid[c] + 1 ATP[c] + 1 coenzyme A[c] => 1 a 2,3,4-saturated fatty acyl CoA[c] + 1 diphosphate[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5136, fatty acid β-oxidation II (peroxisome): PWY-5136
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7288, fatty acid β-oxidation (peroxisome, yeast): PWY-7288
    • 3 reactions found over 5 reactions in the full pathway
  • FAO-PWY, fatty acid β-oxidation I: FAO-PWY
    • 7 reactions found over 7 reactions in the full pathway
  • PWY66-391, fatty acid β-oxidation VI (peroxisome): PWY66-391
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-12457&oldid=5457"