Difference between revisions of "Uridine32-in-tRNA"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10915 RXN-10915] == * direction: ** REVERSIBLE * common name: ** 3,4-dihydroxyphenylglycol dehy...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GERANYL-PP GERANYL-PP] == * smiles: ** CC(=CCCC(=CCOP([O-])(OP(=O)([O-])[O-])=O)C)C * inchi key...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10915 RXN-10915] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GERANYL-PP GERANYL-PP] ==
−
* direction:
+
* smiles:
−
** REVERSIBLE
+
** CC(=CCCC(=CCOP([O-])(OP(=O)([O-])[O-])=O)C)C
 +
* inchi key:
 +
** InChIKey=GVVPGTZRZFNKDS-JXMROGBWSA-K
 
* common name:
 
* common name:
−
** 3,4-dihydroxyphenylglycol dehydrogenase
+
** geranyl diphosphate
−
* ec number:
+
* molecular weight:
−
** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1]
+
** 311.188   
 
* Synonym(s):
 
* Synonym(s):
 +
** geranyl-diphosphate
 +
** geranyl-pyrophosphate
 +
** GPP
 +
** geranyl-PP
 +
** geranyl pyrophosphate
 +
** ω,E-geranyl diphosphate
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[FPPSYN-RXN]]
−
** 1 [[CPD-11497]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[CPD-11876]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c]
+
* [[TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN]]
−
* With common name(s):
+
== Reaction(s) known to produce the compound ==
−
** 1 3-methoxy-4-hydroxyphenylglycol[c] '''+''' 1 NAD+[c] '''<=>''' 1 3-methoxy-4-hydroxyphenylglycolaldehyde[c] '''+''' 1 H+[c] '''+''' 1 NADH[c]
+
== Reaction(s) of unknown directionality ==
−
 
+
* [[GPPSYN-RXN]]
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[CHC_T00010066001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
== Pathways  ==
+
−
* [[PWY-6342]], noradrenaline and adrenaline degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6342 PWY-6342]
+
−
** '''4''' reactions found over '''13''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[galdieria.sulphuraria]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=REVERSIBLE}}
+
* METABOLIGHTS : MTBLC58057
−
{{#set: common name=3,4-dihydroxyphenylglycol dehydrogenase}}
+
* PUBCHEM:
−
{{#set: ec number=EC-1.1.1.1}}
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=19379894 19379894]
−
{{#set: gene associated=CHC_T00010066001_1}}
+
* KNAPSACK : C00000846
−
{{#set: in pathway=PWY-6342}}
+
* HMDB : HMDB01285
−
{{#set: reconstruction category=orthology}}
+
* LIGAND-CPD:
−
{{#set: reconstruction tool=pantograph}}
+
** [http://www.genome.jp/dbget-bin/www_bget?C00341 C00341]
−
{{#set: reconstruction source=galdieria.sulphuraria}}
+
* CHEMSPIDER:
 +
** [http://www.chemspider.com/Chemical-Structure.14211068.html 14211068]
 +
* CHEBI:
 +
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58057 58057]
 +
* BIGG : grdp
 +
{{#set: smiles=CC(=CCCC(=CCOP([O-])(OP(=O)([O-])[O-])=O)C)C}}
 +
{{#set: inchi key=InChIKey=GVVPGTZRZFNKDS-JXMROGBWSA-K}}
 +
{{#set: common name=geranyl diphosphate}}
 +
{{#set: molecular weight=311.188    }}
 +
{{#set: common name=geranyl-diphosphate|geranyl-pyrophosphate|GPP|geranyl-PP|geranyl pyrophosphate|&omega;,E-geranyl diphosphate}}
 +
{{#set: consumed by=FPPSYN-RXN|TRANS-OCTAPRENYLTRANSTRANSFERASE-RXN}}
 +
{{#set: consumed or produced by=GPPSYN-RXN}}

Revision as of 11:57, 18 January 2018

Metabolite GERANYL-PP

  • smiles:
    • CC(=CCCC(=CCOP([O-])(OP(=O)([O-])[O-])=O)C)C
  • inchi key:
    • InChIKey=GVVPGTZRZFNKDS-JXMROGBWSA-K
  • common name:
    • geranyl diphosphate
  • molecular weight:
    • 311.188
  • Synonym(s):
    • geranyl-diphosphate
    • geranyl-pyrophosphate
    • GPP
    • geranyl-PP
    • geranyl pyrophosphate
    • ω,E-geranyl diphosphate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • METABOLIGHTS : MTBLC58057
  • PUBCHEM:
  • KNAPSACK : C00000846
  • HMDB : HMDB01285
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • BIGG : grdp
"CC(=CCCC(=CCOP([O-])(OP(=O)([O-])[O-])=O)C)C" cannot be used as a page name in this wiki.




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=Uridine32-in-tRNA&oldid=5652"