Difference between revisions of "PWY-6524"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=AMMONIUM AMMONIUM] == * smiles: ** [NH4+] * inchi key: ** InChIKey=QGZKDVFQNNGYKY-UHFFFAOYSA-O...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.11.1-RXN 3.4.11.1-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=AMMONIUM AMMONIUM] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.11.1-RXN 3.4.11.1-RXN] ==
* smiles:
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* direction:
** [NH4+]
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** LEFT-TO-RIGHT
* inchi key:
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* ec number:
** InChIKey=QGZKDVFQNNGYKY-UHFFFAOYSA-O
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** [http://enzyme.expasy.org/EC/3.4.11.1 EC-3.4.11.1]
* common name:
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** ammonium
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* molecular weight:
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** 18.038   
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* Synonym(s):
 
* Synonym(s):
** NH4+
 
  
== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
* [[GLUTAMINESYN-RXN]]
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* With identifiers:
* [[DIPHTINE--AMMONIA-LIGASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[Protein-With-N-Terminal-X-Pro]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Amino-Acids-20]][c] '''+''' 1 [[Protein-With-N-Terminal-Pro]][c]
* [[ASNSYNA-RXN]]
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* With common name(s):
* [[RXN-13202]]
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** 1 H2O[c] '''+''' 1 a peptide with an N-terminal X-L-proline[c] '''=>''' 1 H+[c] '''+''' 1 a proteinogenic amino acid[c] '''+''' 1 a peptide with an N-terminal L-proline[c]
* [[GMP-SYN-NH3-RXN]]
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* [[TransportSeed_AMMONIUM]]
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== Genes associated with this reaction  ==
* [[RXN-9615]]
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Genes have been associated with this reaction based on different elements listed below.
* [[RXN-16910]]
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* [[CHC_T00004445001_1]]
* [[RXN-14325]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
== Reaction(s) known to produce the compound ==
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* [[CHC_T00002840001_1]]
* [[BETA-UREIDOPROPIONASE-RXN]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
* [[RXN0-1081]]
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== Pathways  ==
* [[RXN0-5222]]
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== Reconstruction information  ==
* [[CYTIDEAM-RXN]]
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* [[orthology]]:
* [[DCMP-DEAMINASE-RXN]]
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** [[pantograph]]:
* [[TransportSeed_AMMONIUM]]
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*** [[galdieria.sulphuraria]]
* [[GLUTAMIN-RXN]]
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* [[RXN-18229]]
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* [[ADENODEAMIN-RXN]]
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* [[AMP-DEAMINASE-RXN]]
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* [[RXN-12878]]
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* [[RXN-8163]]
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* [[N-CARBAMOYLPUTRESCINE-AMIDASE-RXN]]
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* [[RXN-11210]]
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* [[RXN-9615]]
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* [[ALLOPHANATE-HYDROLASE-RXN]]
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* [[PHENYLALANINE-AMMONIA-LYASE-RXN]]
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* [[PMPOXI-RXN]]
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* [[FERREDOXIN--NITRITE-REDUCTASE-RXN]]
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* [[CYTIDEAM2-RXN]]
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* [[RIBOFLAVINSYNDEAM-RXN]]
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* [[RXN-646]]
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* [[CYSTATHIONINE-BETA-LYASE-RXN]]
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* [[ORNITHINE-CYCLODEAMINASE-RXN]]
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* [[ASPARAGHYD-RXN]]
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* [[THREDEHYD-RXN]]
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* [[ETHAMLY-RXN]]
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* [[RXN-1404]]
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* [[4.3.1.17-RXN]]
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* [[OHMETHYLBILANESYN-RXN]]
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* [[METBALT-RXN]]
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* [[1.4.3.19-RXN]]
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* [[RXN-15127]]
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* [[D-AMINO-ACID-OXIDASE-RXN]]
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* [[RXN-8899]]
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* [[RXN-12729]]
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* [[NICOTINAMID-RXN]]
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* [[RXN-8672]]
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* [[ADDALT-RXN]]
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== Reaction(s) of unknown directionality ==
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* [[GLUTAMATE-DEHYDROGENASE-NADP+-RXN]]
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* [[ExchangeSeed_AMMONIUM]]
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* [[GCVMULTI-RXN-GLY/THF/NAD//METHYLENE-THF/AMMONIUM/CARBON-DIOXIDE/NADH.56.]]
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* [[3.5.5.1-RXN]]
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* [[GLUTAMATE-DEHYDROGENASE-RXN]]
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* [[ETHANOLAMINE-PHOSPHATE-PHOSPHO-LYASE-RXN]]
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* [[ARGININE-DEIMINASE-RXN]]
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* [[RXN-17607]]
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* [[RXN-11811]]
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* [[GCVT-RXN]]
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* [[GLUTDEHYD-RXN]]
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* [[3.5.1.87-RXN]]
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== External links  ==
 
== External links  ==
* CAS : 14798-03-9
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* UNIPROT:
* METABOLIGHTS : MTBLC28938
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** [http://www.uniprot.org/uniprot/P27888 P27888]
* PUBCHEM:
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** [http://www.uniprot.org/uniprot/P00727 P00727]
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=223 223]
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** [http://www.uniprot.org/uniprot/P68767 P68767]
* HMDB : HMDB41827
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** [http://www.uniprot.org/uniprot/P45334 P45334]
* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/Q9JTI8 Q9JTI8]
** [http://www.genome.jp/dbget-bin/www_bget?C01342 C01342]
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** [http://www.uniprot.org/uniprot/Q9PP04 Q9PP04]
* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/P24828 P24828]
** [http://www.chemspider.com/Chemical-Structure.218.html 218]
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** [http://www.uniprot.org/uniprot/P23341 P23341]
* CHEBI:
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** [http://www.uniprot.org/uniprot/P28839 P28839]
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=28938 28938]
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** [http://www.uniprot.org/uniprot/P30184 P30184]
* BIGG : nh4
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** [http://www.uniprot.org/uniprot/P31427 P31427]
{{#set: smiles=[NH4+]}}
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** [http://www.uniprot.org/uniprot/Q42876 Q42876]
{{#set: inchi key=InChIKey=QGZKDVFQNNGYKY-UHFFFAOYSA-O}}
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** [http://www.uniprot.org/uniprot/Q48531 Q48531]
{{#set: common name=ammonium}}
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** [http://www.uniprot.org/uniprot/O24022 O24022]
{{#set: molecular weight=18.038    }}
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** [http://www.uniprot.org/uniprot/Q10712 Q10712]
{{#set: common name=NH4+}}
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** [http://www.uniprot.org/uniprot/Q43034 Q43034]
{{#set: consumed by=GLUTAMINESYN-RXN|DIPHTINE--AMMONIA-LIGASE-RXN|ASNSYNA-RXN|RXN-13202|GMP-SYN-NH3-RXN|TransportSeed_AMMONIUM|RXN-9615|RXN-16910|RXN-14325}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: produced by=BETA-UREIDOPROPIONASE-RXN|RXN0-1081|RXN0-5222|CYTIDEAM-RXN|DCMP-DEAMINASE-RXN|TransportSeed_AMMONIUM|GLUTAMIN-RXN|RXN-18229|ADENODEAMIN-RXN|AMP-DEAMINASE-RXN|RXN-12878|RXN-8163|N-CARBAMOYLPUTRESCINE-AMIDASE-RXN|RXN-11210|RXN-9615|ALLOPHANATE-HYDROLASE-RXN|PHENYLALANINE-AMMONIA-LYASE-RXN|PMPOXI-RXN|FERREDOXIN--NITRITE-REDUCTASE-RXN|CYTIDEAM2-RXN|RIBOFLAVINSYNDEAM-RXN|RXN-646|CYSTATHIONINE-BETA-LYASE-RXN|ORNITHINE-CYCLODEAMINASE-RXN|ASPARAGHYD-RXN|THREDEHYD-RXN|ETHAMLY-RXN|RXN-1404|4.3.1.17-RXN|OHMETHYLBILANESYN-RXN|METBALT-RXN|1.4.3.19-RXN|RXN-15127|D-AMINO-ACID-OXIDASE-RXN|RXN-8899|RXN-12729|NICOTINAMID-RXN|RXN-8672|ADDALT-RXN}}
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{{#set: ec number=EC-3.4.11.1}}
{{#set: consumed or produced by=GLUTAMATE-DEHYDROGENASE-NADP+-RXN|ExchangeSeed_AMMONIUM|GCVMULTI-RXN-GLY/THF/NAD//METHYLENE-THF/AMMONIUM/CARBON-DIOXIDE/NADH.56.|3.5.5.1-RXN|GLUTAMATE-DEHYDROGENASE-RXN|ETHANOLAMINE-PHOSPHATE-PHOSPHO-LYASE-RXN|ARGININE-DEIMINASE-RXN|RXN-17607|RXN-11811|GCVT-RXN|GLUTDEHYD-RXN|3.5.1.87-RXN}}
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{{#set: gene associated=CHC_T00004445001_1|CHC_T00002840001_1}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=galdieria.sulphuraria}}

Revision as of 12:10, 18 January 2018

Reaction 3.4.11.1-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links