Difference between revisions of "RXN-9237"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5849 PWY-5849] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1321 RXN-1321] == * direction: ** LEFT-TO-RIGHT * common name: ** Lipoxygenase * ec number: **...")
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[[Category:Pathway]]
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[[Category:Reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5849 PWY-5849] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1321 RXN-1321] ==
* taxonomic range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
** menaquinol-6 biosynthesis
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** Lipoxygenase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.13.11.12 EC-1.13.11.12]
 
* Synonym(s):
 
* Synonym(s):
** vitamin K2 biosynthesis
 
** MK-6 biosynthesis
 
** menaquinone-6 biosynthesis
 
  
== Reaction(s) found ==
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== Reaction Formula ==
* '''1''' reaction(s) found
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* With identifiers:
** [[RXN-9220]]
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** 1 [[LINOLENIC_ACID]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CPD-725]][c]
== Reaction(s) not found ==
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* With common name(s):
* '''0''' reaction(s) not found
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** 1 α-linolenate[c] '''+''' 1 oxygen[c] '''=>''' 1 13(S)-HPOTE[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[CHC_T00008739001_1]]
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** [[pantograph]]-[[a.taliana]]
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* [[CHC_T00008739001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
 +
* [[PWY-5410]], traumatin and (Z)-3-hexen-1-yl acetate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5410 PWY-5410]
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** '''1''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
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** '''13''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
 +
* [[orthology]]:
 +
** [[pantograph]]:
 +
*** [[a.taliana]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[original_genome]]
 
== External links  ==
 
== External links  ==
{{#set: taxonomic range=TAX-2}}
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* RHEA:
{{#set: common name=menaquinol-6 biosynthesis}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=34495 34495]
{{#set: common name=vitamin K2 biosynthesis|MK-6 biosynthesis|menaquinone-6 biosynthesis}}
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* LIGAND-RXN:
{{#set: reaction found=1}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07869 R07869]
{{#set: reaction not found=0}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Lipoxygenase}}
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{{#set: ec number=EC-1.13.11.12}}
 +
{{#set: gene associated=CHC_T00008739001_1|CHC_T00008739001}}
 +
{{#set: in pathway=PWY-5410|PWY-735}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=a.taliana}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=original_genome}}

Revision as of 11:10, 18 January 2018

Reaction RXN-1321

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Lipoxygenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5410, traumatin and (Z)-3-hexen-1-yl acetate biosynthesis: PWY-5410
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-735, jasmonic acid biosynthesis: PWY-735
    • 13 reactions found over 19 reactions in the full pathway

Reconstruction information

External links