Difference between revisions of "RXN-11989"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCOGEN-BRANCH-RXN GLYCOGEN-BRANCH-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 1,4-alp...")
 
(Created page with "Category:Gene == Gene CHC_T00010058001 == * left end position: ** 50466 * transcription direction: ** POSITIVE * right end position: ** 51689 * centisome position: ** 9.34...")
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCOGEN-BRANCH-RXN GLYCOGEN-BRANCH-RXN] ==
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== Gene CHC_T00010058001 ==
* direction:
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* left end position:
** LEFT-TO-RIGHT
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** 50466
* common name:
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* transcription direction:
** 1,4-alpha-Glucan branching enzyme
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** POSITIVE
* ec number:
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* right end position:
** [http://enzyme.expasy.org/EC/2.4.1.18 EC-2.4.1.18]
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** 51689
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* centisome position:
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** 9.341991   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* [[TRYPTOPHAN--TRNA-LIGASE-RXN]]
** 1 [[1-4-alpha-D-Glucan]][c] '''=>''' 1 [[Glycogens]][c]
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** original_genome
* With common name(s):
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***automated-name-match
** 1 a 1,4-α-D-glucan[c] '''=>''' 1 a glycogen[c]
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== Pathways associated ==
 
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* [[TRNA-CHARGING-PWY]]
== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[CHC_T00008662001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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* [[CHC_T00008662001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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== Pathways ==
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* [[GLYCOGENSYNTH-PWY]], glycogen biosynthesis I (from ADP-D-Glucose): [http://metacyc.org/META/NEW-IMAGE?object=GLYCOGENSYNTH-PWY GLYCOGENSYNTH-PWY]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[original_genome]]
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== External links  ==
 
== External links  ==
* UNIPROT:
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{{#set: left end position=50466}}
** [http://www.uniprot.org/uniprot/Q04446 Q04446]
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{{#set: transcription direction=POSITIVE}}
** [http://www.uniprot.org/uniprot/P30539 P30539]
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{{#set: right end position=51689}}
** [http://www.uniprot.org/uniprot/P30537 P30537]
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{{#set: centisome position=9.341991    }}
** [http://www.uniprot.org/uniprot/P45177 P45177]
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{{#set: reaction associated=TRYPTOPHAN--TRNA-LIGASE-RXN}}
** [http://www.uniprot.org/uniprot/P16954 P16954]
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{{#set: pathway associated=TRNA-CHARGING-PWY}}
** [http://www.uniprot.org/uniprot/Q41740 Q41740]
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** [http://www.uniprot.org/uniprot/Q01401 Q01401]
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** [http://www.uniprot.org/uniprot/P07762 P07762]
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** [http://www.uniprot.org/uniprot/Q7M284 Q7M284]
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** [http://www.uniprot.org/uniprot/P30538 P30538]
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** [http://www.uniprot.org/uniprot/Q08809 Q08809]
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** [http://www.uniprot.org/uniprot/Q59243 Q59243]
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** [http://www.uniprot.org/uniprot/Q40733 Q40733]
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** [http://www.uniprot.org/uniprot/Q59832 Q59832]
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** [http://www.uniprot.org/uniprot/P30924 P30924]
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** [http://www.uniprot.org/uniprot/P39118 P39118]
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** [http://www.uniprot.org/uniprot/P52980 P52980]
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** [http://www.uniprot.org/uniprot/P32775 P32775]
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** [http://www.uniprot.org/uniprot/Q42526 Q42526]
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** [http://www.uniprot.org/uniprot/Q42531 Q42531]
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** [http://www.uniprot.org/uniprot/Q59833 Q59833]
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** [http://www.uniprot.org/uniprot/O81387 O81387]
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** [http://www.uniprot.org/uniprot/O24421 O24421]
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** [http://www.uniprot.org/uniprot/Q08047 Q08047]
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** [http://www.uniprot.org/uniprot/O24393 O24393]
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** [http://www.uniprot.org/uniprot/Q41058 Q41058]
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** [http://www.uniprot.org/uniprot/Q41059 Q41059]
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** [http://www.uniprot.org/uniprot/P93691 P93691]
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** [http://www.uniprot.org/uniprot/O04074 O04074]
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** [http://www.uniprot.org/uniprot/O24397 O24397]
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** [http://www.uniprot.org/uniprot/O49953 O49953]
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** [http://www.uniprot.org/uniprot/O04864 O04864]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=1,4-alpha-Glucan branching enzyme}}
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{{#set: ec number=EC-2.4.1.18}}
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{{#set: gene associated=CHC_T00008662001|CHC_T00008662001_1}}
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{{#set: in pathway=GLYCOGENSYNTH-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}
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Revision as of 11:16, 18 January 2018

Gene CHC_T00010058001

  • left end position:
    • 50466
  • transcription direction:
    • POSITIVE
  • right end position:
    • 51689
  • centisome position:
    • 9.341991
  • Synonym(s):

Reactions associated

Pathways associated

External links