Difference between revisions of "RNASE-E-MRNA-PROCESSING-SUBSTRATE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CATAL-RXN CATAL-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-484 RXN66-484] == * direction: ** LEFT-TO-RIGHT * common name: ** long-chain-fatty-acid-CoA l...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CATAL-RXN CATAL-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-484 RXN66-484] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** long-chain-fatty-acid-CoA ligase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.11.1.6 EC-1.11.1.6]
+
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
−
** [http://enzyme.expasy.org/EC/1.11.1.21 EC-1.11.1.21]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2 [[HYDROGEN-PEROXIDE]][c] '''=>''' 2 [[WATER]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c]
+
** 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[PRISTANATE]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[CPD-14675]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2 hydrogen peroxide[c] '''=>''' 2 H2O[c] '''+''' 1 oxygen[c]
+
** 1 coenzyme A[c] '''+''' 1 ATP[c] '''+''' 1 pristanate[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 pristanoyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00007915001_1]]
+
* [[CHC_T00008500001_1]]
 +
** [[pantograph]]-[[galdieria.sulphuraria]]
 +
* [[CHC_T00009428001]]
 +
** ORIGINAL_GENOME
 +
***AUTOMATED-NAME-MATCH
 +
* [[CHC_T00009428001_1]]
 +
** [[pantograph]]-[[galdieria.sulphuraria]]
 +
* [[CHC_T00008811001]]
 +
** ORIGINAL_GENOME
 +
***AUTOMATED-NAME-MATCH
 +
* [[CHC_T00008811001_1]]
 +
** [[pantograph]]-[[galdieria.sulphuraria]]
 +
* [[CHC_T00008160001_1]]
 
** [[pantograph]]-[[galdieria.sulphuraria]]
 
** [[pantograph]]-[[galdieria.sulphuraria]]
−
** [[pantograph]]-[[a.taliana]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5506]], methanol oxidation to formaldehyde IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5506 PWY-5506]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[DETOX1-PWY-1]], reactive oxygen species degradation: [http://metacyc.org/META/NEW-IMAGE?object=DETOX1-PWY-1 DETOX1-PWY-1]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[DETOX1-PWY]], superoxide radicals degradation: [http://metacyc.org/META/NEW-IMAGE?object=DETOX1-PWY DETOX1-PWY]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 
*** [[galdieria.sulphuraria]]
 
*** [[galdieria.sulphuraria]]
−
*** [[a.taliana]]
+
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[original_genome]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20309 20309]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00009 R00009]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P11934 P11934]
 
−
** [http://www.uniprot.org/uniprot/P24270 P24270]
 
−
** [http://www.uniprot.org/uniprot/P21179 P21179]
 
−
** [http://www.uniprot.org/uniprot/P24168 P24168]
 
−
** [http://www.uniprot.org/uniprot/Q7M184 Q7M184]
 
−
** [http://www.uniprot.org/uniprot/P0A327 P0A327]
 
−
** [http://www.uniprot.org/uniprot/P45737 P45737]
 
−
** [http://www.uniprot.org/uniprot/P42321 P42321]
 
−
** [http://www.uniprot.org/uniprot/O28050 O28050]
 
−
** [http://www.uniprot.org/uniprot/Q59337 Q59337]
 
−
** [http://www.uniprot.org/uniprot/P77872 P77872]
 
−
** [http://www.uniprot.org/uniprot/P00432 P00432]
 
−
** [http://www.uniprot.org/uniprot/P15202 P15202]
 
−
** [http://www.uniprot.org/uniprot/P06115 P06115]
 
−
** [http://www.uniprot.org/uniprot/P07820 P07820]
 
−
** [http://www.uniprot.org/uniprot/P17750 P17750]
 
−
** [http://www.uniprot.org/uniprot/P13029 P13029]
 
−
** [http://www.uniprot.org/uniprot/P17336 P17336]
 
−
** [http://www.uniprot.org/uniprot/P04040 P04040]
 
−
** [http://www.uniprot.org/uniprot/P25890 P25890]
 
−
** [http://www.uniprot.org/uniprot/P04762 P04762]
 
−
** [http://www.uniprot.org/uniprot/P29756 P29756]
 
−
** [http://www.uniprot.org/uniprot/P44390 P44390]
 
−
** [http://www.uniprot.org/uniprot/P42234 P42234]
 
−
** [http://www.uniprot.org/uniprot/Q9JRF5 Q9JRF5]
 
−
** [http://www.uniprot.org/uniprot/P94377 P94377]
 
−
** [http://www.uniprot.org/uniprot/Q9ZKX5 Q9ZKX5]
 
−
** [http://www.uniprot.org/uniprot/Q59296 Q59296]
 
−
** [http://www.uniprot.org/uniprot/P55306 P55306]
 
−
** [http://www.uniprot.org/uniprot/P26901 P26901]
 
−
** [http://www.uniprot.org/uniprot/P14412 P14412]
 
−
** [http://www.uniprot.org/uniprot/P07145 P07145]
 
−
** [http://www.uniprot.org/uniprot/P17598 P17598]
 
−
** [http://www.uniprot.org/uniprot/Q41136 Q41136]
 
−
** [http://www.uniprot.org/uniprot/P30567 P30567]
 
−
** [http://www.uniprot.org/uniprot/P30263 P30263]
 
−
** [http://www.uniprot.org/uniprot/P29422 P29422]
 
−
** [http://www.uniprot.org/uniprot/P30266 P30266]
 
−
** [http://www.uniprot.org/uniprot/P37743 P37743]
 
−
** [http://www.uniprot.org/uniprot/P33569 P33569]
 
−
** [http://www.uniprot.org/uniprot/P18123 P18123]
 
−
** [http://www.uniprot.org/uniprot/P55303 P55303]
 
−
** [http://www.uniprot.org/uniprot/Q01297 Q01297]
 
−
** [http://www.uniprot.org/uniprot/P49318 P49318]
 
−
** [http://www.uniprot.org/uniprot/P18122 P18122]
 
−
** [http://www.uniprot.org/uniprot/P49315 P49315]
 
−
** [http://www.uniprot.org/uniprot/Q27710 Q27710]
 
−
** [http://www.uniprot.org/uniprot/P45739 P45739]
 
−
** [http://www.uniprot.org/uniprot/P0A323 P0A323]
 
−
** [http://www.uniprot.org/uniprot/P55307 P55307]
 
−
** [http://www.uniprot.org/uniprot/P55308 P55308]
 
−
** [http://www.uniprot.org/uniprot/P55305 P55305]
 
−
** [http://www.uniprot.org/uniprot/P50979 P50979]
 
−
** [http://www.uniprot.org/uniprot/Q55110 Q55110]
 
−
** [http://www.uniprot.org/uniprot/P12365 P12365]
 
−
** [http://www.uniprot.org/uniprot/P73911 P73911]
 
−
** [http://www.uniprot.org/uniprot/P77038 P77038]
 
−
** [http://www.uniprot.org/uniprot/P25819 P25819]
 
−
** [http://www.uniprot.org/uniprot/O48562 O48562]
 
−
** [http://www.uniprot.org/uniprot/Q43206 Q43206]
 
−
** [http://www.uniprot.org/uniprot/O22472 O22472]
 
−
** [http://www.uniprot.org/uniprot/P30265 P30265]
 
−
** [http://www.uniprot.org/uniprot/P48351 P48351]
 
−
** [http://www.uniprot.org/uniprot/P48352 P48352]
 
−
** [http://www.uniprot.org/uniprot/Q39633 Q39633]
 
−
** [http://www.uniprot.org/uniprot/Q39634 Q39634]
 
−
** [http://www.uniprot.org/uniprot/P32290 P32290]
 
−
** [http://www.uniprot.org/uniprot/O81336 O81336]
 
−
** [http://www.uniprot.org/uniprot/O81337 O81337]
 
−
** [http://www.uniprot.org/uniprot/P49317 P49317]
 
−
** [http://www.uniprot.org/uniprot/Q27487 Q27487]
 
−
** [http://www.uniprot.org/uniprot/Q8MYL7 Q8MYL7]
 
−
** [http://www.uniprot.org/uniprot/Q9Z598 Q9Z598]
 
−
** [http://www.uniprot.org/uniprot/O61235 O61235]
 
−
** [http://www.uniprot.org/uniprot/O33613 O33613]
 
−
** [http://www.uniprot.org/uniprot/P77948 P77948]
 
−
** [http://www.uniprot.org/uniprot/O73955 O73955]
 
−
** [http://www.uniprot.org/uniprot/O59651 O59651]
 
−
** [http://www.uniprot.org/uniprot/O31066 O31066]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-1.11.1.6}}
+
{{#set: common name=long-chain-fatty-acid-CoA ligase}}
−
{{#set: ec number=EC-1.11.1.21}}
+
{{#set: ec number=EC-6.2.1.3}}
−
{{#set: gene associated=CHC_T00007915001_1}}
+
{{#set: gene associated=CHC_T00008500001_1|CHC_T00009428001|CHC_T00009428001_1|CHC_T00008811001|CHC_T00008811001_1|CHC_T00008160001_1}}
−
{{#set: in pathway=PWY-5506|DETOX1-PWY-1|DETOX1-PWY}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
+
{{#set: reconstruction source=galdieria.sulphuraria}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=original_genome}}

Revision as of 11:18, 18 January 2018

Reaction RXN66-484

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • long-chain-fatty-acid-CoA ligase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 coenzyme A[c] + 1 ATP[c] + 1 pristanate[c] => 1 diphosphate[c] + 1 AMP[c] + 1 pristanoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RNASE-E-MRNA-PROCESSING-SUBSTRATE&oldid=7439"