Difference between revisions of "THREONINE-ALDOLASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCCOASYN-RXN SUCCCOASYN-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy....")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE-AMINOTRANSFERASE-RXN TYROSINE-AMINOTRANSFERASE-RXN] == * direction: ** REVERSIBLE * common...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SUCCCOASYN-RXN SUCCCOASYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE-AMINOTRANSFERASE-RXN TYROSINE-AMINOTRANSFERASE-RXN] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 +
* common name:
 +
** tyrosine aminotransferase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.2.1.5 EC-6.2.1.5]
+
** [http://enzyme.expasy.org/EC/2.6.1.57 EC-2.6.1.57]
 +
** [http://enzyme.expasy.org/EC/2.6.1.5 EC-2.6.1.5]
 
* Synonym(s):
 
* Synonym(s):
−
** Succinate thiokinase
 
−
** succinyl CoA synthesis
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[SUC]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''<=>''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[SUC-COA]][c]
+
** 1 [[TYR]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[P-HYDROXY-PHENYLPYRUVATE]][c] '''+''' 1 [[GLT]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 succinate[c] '''+''' 1 ATP[c] '''+''' 1 coenzyme A[c] '''<=>''' 1 ADP[c] '''+''' 1 phosphate[c] '''+''' 1 succinyl-CoA[c]
+
** 1 L-tyrosine[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 4-hydroxyphenylpyruvate[c] '''+''' 1 L-glutamate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00008602001_1]]
+
* [[CHC_T00008863001]]
 +
** ORIGINAL_GENOME
 +
***AUTOMATED-NAME-MATCH
 +
* [[CHC_T00008863001_1]]
 
** [[pantograph]]-[[galdieria.sulphuraria]]
 
** [[pantograph]]-[[galdieria.sulphuraria]]
−
** [[pantograph]]-[[a.taliana]]
 
−
* [[CHC_T00009212001_1]]
 
−
** [[pantograph]]-[[galdieria.sulphuraria]]
 
−
** [[pantograph]]-[[a.taliana]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5913]], partial TCA cycle (obligate autotrophs): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913]
+
* [[PWY-3581]], (S)-reticuline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3581 PWY-3581]
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
** '''2''' reactions found over '''11''' reactions in the full pathway
−
* [[P42-PWY]], incomplete reductive TCA cycle: [http://metacyc.org/META/NEW-IMAGE?object=P42-PWY P42-PWY]
+
* [[TYRFUMCAT-PWY]], L-tyrosine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=TYRFUMCAT-PWY TYRFUMCAT-PWY]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7384 PWY-7384]
+
* [[PWY-5886]], 4-hydroxyphenylpyruvate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5886 PWY-5886]
−
** '''5''' reactions found over '''12''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-5392]], reductive TCA cycle II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5392 PWY-5392]
+
* [[PWY-5151]], L-tyrosine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5151 PWY-5151]
−
** '''5''' reactions found over '''12''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[P23-PWY]], reductive TCA cycle I: [http://metacyc.org/META/NEW-IMAGE?object=P23-PWY P23-PWY]
+
* [[PWY-7518]], atromentin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7518 PWY-7518]
−
** '''9''' reactions found over '''12''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6969]], TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6969 PWY-6969]
+
* [[TYRSYN]], L-tyrosine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=TYRSYN TYRSYN]
−
** '''8''' reactions found over '''12''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5537]], pyruvate fermentation to acetate V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5537 PWY-5537]
+
* [[PWY3O-4108]], L-tyrosine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-4108 PWY3O-4108]
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
** '''2''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6728]], methylaspartate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6728 PWY-6728]
+
* [[PWY-5754]], 4-hydroxybenzoate biosynthesis I (eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5754 PWY-5754]
−
** '''9''' reactions found over '''18''' reactions in the full pathway
+
** '''2''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-5538]], pyruvate fermentation to acetate VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5538 PWY-5538]
+
* [[PWY-7514]], L-tyrosine degradation IV (to 4-methylphenol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7514 PWY-7514]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5690]], TCA cycle II (plants and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5690 PWY-5690]
+
* [[PWY-5048]], rosmarinic acid biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5048 PWY-5048]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY66-398]], TCA cycle III (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398]
+
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
−
* [[TCA]], TCA cycle I (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=TCA TCA]
+
−
** '''9''' reactions found over '''10''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 
*** [[galdieria.sulphuraria]]
 
*** [[galdieria.sulphuraria]]
−
*** [[a.taliana]]
+
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[original_genome]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17661 17661]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15093 15093]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00405 R00405]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00734 R00734]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/O28098 O28098]
+
** [http://www.uniprot.org/uniprot/P74861 P74861]
−
** [http://www.uniprot.org/uniprot/P53594 P53594]
+
** [http://www.uniprot.org/uniprot/Q9UWK8 Q9UWK8]
−
** [http://www.uniprot.org/uniprot/O28733 O28733]
+
** [http://www.uniprot.org/uniprot/Q9UWK9 Q9UWK9]
−
** [http://www.uniprot.org/uniprot/P45101 P45101]
+
** [http://www.uniprot.org/uniprot/P95468 P95468]
−
** [http://www.uniprot.org/uniprot/P45102 P45102]
+
** [http://www.uniprot.org/uniprot/Q9JYA1 Q9JYA1]
−
** [http://www.uniprot.org/uniprot/Q9JUT0 Q9JUT0]
+
** [http://www.uniprot.org/uniprot/Q9JT83 Q9JT83]
−
** [http://www.uniprot.org/uniprot/Q58643 Q58643]
+
** [http://www.uniprot.org/uniprot/Q9UZ63 Q9UZ63]
−
** [http://www.uniprot.org/uniprot/O26663 O26663]
+
** [http://www.uniprot.org/uniprot/O58489 O58489]
−
** [http://www.uniprot.org/uniprot/P80886 P80886]
+
** [http://www.uniprot.org/uniprot/O59096 O59096]
−
** [http://www.uniprot.org/uniprot/Q9PHY1 Q9PHY1]
+
** [http://www.uniprot.org/uniprot/Q9PHA8 Q9PHA8]
−
** [http://www.uniprot.org/uniprot/Q9JUS9 Q9JUS9]
+
** [http://www.uniprot.org/uniprot/Q9V0L2 Q9V0L2]
−
** [http://www.uniprot.org/uniprot/P80865 P80865]
+
** [http://www.uniprot.org/uniprot/Q9Z7G5 Q9Z7G5]
−
** [http://www.uniprot.org/uniprot/Q9PHY0 Q9PHY0]
+
** [http://www.uniprot.org/uniprot/Q02636 Q02636]
−
** [http://www.uniprot.org/uniprot/O67729 O67729]
+
** [http://www.uniprot.org/uniprot/O84642 O84642]
−
** [http://www.uniprot.org/uniprot/O67546 O67546]
+
** [http://www.uniprot.org/uniprot/P17735 P17735]
−
** [http://www.uniprot.org/uniprot/P53593 P53593]
+
** [http://www.uniprot.org/uniprot/Q7M4A9 Q7M4A9]
−
** [http://www.uniprot.org/uniprot/P0AGE9 P0AGE9]
+
** [http://www.uniprot.org/uniprot/P04693 P04693]
−
** [http://www.uniprot.org/uniprot/P0A836 P0A836]
+
** [http://www.uniprot.org/uniprot/P04694 P04694]
−
** [http://www.uniprot.org/uniprot/O82662 O82662]
+
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: ec number=EC-6.2.1.5}}
+
{{#set: common name=tyrosine aminotransferase}}
−
{{#set: common name=Succinate thiokinase|succinyl CoA synthesis}}
+
{{#set: ec number=EC-2.6.1.57}}
−
{{#set: gene associated=CHC_T00008602001_1|CHC_T00009212001_1}}
+
{{#set: ec number=EC-2.6.1.5}}
−
{{#set: in pathway=PWY-5913|P42-PWY|PWY-7384|PWY-5392|P23-PWY|PWY-6969|PWY-5537|PWY-6728|PWY-5538|PWY-5690|PWY66-398|TCA}}
+
{{#set: gene associated=CHC_T00008863001|CHC_T00008863001_1}}
 +
{{#set: in pathway=PWY-3581|TYRFUMCAT-PWY|PWY-5886|PWY-5151|PWY-7518|TYRSYN|PWY3O-4108|PWY-5754|PWY-7514|PWY-5048}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
+
{{#set: reconstruction source=galdieria.sulphuraria}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=original_genome}}

Revision as of 11:18, 18 January 2018

Reaction TYROSINE-AMINOTRANSFERASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • tyrosine aminotransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-3581, (S)-reticuline biosynthesis I: PWY-3581
    • 2 reactions found over 11 reactions in the full pathway
  • TYRFUMCAT-PWY, L-tyrosine degradation I: TYRFUMCAT-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-5886, 4-hydroxyphenylpyruvate biosynthesis: PWY-5886
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-5151, L-tyrosine degradation II: PWY-5151
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7518, atromentin biosynthesis: PWY-7518
    • 1 reactions found over 2 reactions in the full pathway
  • TYRSYN, L-tyrosine biosynthesis I: TYRSYN
    • 3 reactions found over 3 reactions in the full pathway
  • PWY3O-4108, L-tyrosine degradation III: PWY3O-4108
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-5754, 4-hydroxybenzoate biosynthesis I (eukaryotes): PWY-5754
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-7514, L-tyrosine degradation IV (to 4-methylphenol): PWY-7514
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-5048, rosmarinic acid biosynthesis I: PWY-5048
    • 1 reactions found over 7 reactions in the full pathway

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=THREONINE-ALDOLASE-RXN&oldid=7461"