Difference between revisions of "FASYN-INITIAL-PWY"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.5-RXN 3.1.26.5-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13613 CPD-13613] == * smiles: ** CCCCCCCCCCCCCCCC(C(CO)[N+])O * inchi key: ** InChIKey=OTKJ...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.5-RXN 3.1.26.5-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13613 CPD-13613] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** CCCCCCCCCCCCCCCC(C(CO)[N+])O
−
* ec number:
+
* inchi key:
−
** [http://enzyme.expasy.org/EC/3.1.26.5 EC-3.1.26.5]
+
** InChIKey=OTKJDMGTUTTYMP-ROUUACIJSA-O
 +
* common name:
 +
** L-threo-sphinganine
 +
* molecular weight:
 +
** 302.519   
 
* Synonym(s):
 
* Synonym(s):
 +
** L-threo-dihydrosphingosine
 +
** threo-L-sphinganine
 +
** L-threo-DHS
 +
** L-threo-dihydrosphingosine (C18)
 +
** L-threo-sphinganine (C18)
 +
** safingol
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
== Reaction(s) known to produce the compound ==
−
** 1 [[WATER]][c] '''+''' 1 [[CPD0-2352]][c] '''=>''' 1 [[tRNA-fragment]][c] '''+''' 1 [[CPD0-2353]][c]
+
== Reaction(s) of unknown directionality ==
−
* With common name(s):
+
* [[RXN-12645]]
−
** 1 H2O[c] '''+''' 1 a tRNA precursor with a 5' extension and a short 3' extension[c] '''=>''' 1 a tRNA fragment[c] '''+''' 1 a tRNA precursor with a short 3' extension[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[CHC_T00004542001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
== Pathways  ==
+
−
* [[PWY0-1479]], tRNA processing: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1479 PWY0-1479]
+
−
** '''6''' reactions found over '''10''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[galdieria.sulphuraria]]
+
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
+
* PUBCHEM:
−
** [http://www.uniprot.org/uniprot/Q02773 Q02773]
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=102515217 102515217]
−
** [http://www.uniprot.org/uniprot/P41812 P41812]
+
* CHEMSPIDER:
−
** [http://www.uniprot.org/uniprot/P0A5X8 P0A5X8]
+
** [http://www.chemspider.com/Chemical-Structure.2319840.html 2319840]
−
** [http://www.uniprot.org/uniprot/P48206 P48206]
+
{{#set: smiles=CCCCCCCCCCCCCCCC(C(CO)[N+])O}}
−
** [http://www.uniprot.org/uniprot/Q9JW46 Q9JW46]
+
{{#set: inchi key=InChIKey=OTKJDMGTUTTYMP-ROUUACIJSA-O}}
−
** [http://www.uniprot.org/uniprot/Q9PNX5 Q9PNX5]
+
{{#set: common name=L-threo-sphinganine}}
−
** [http://www.uniprot.org/uniprot/Q9CJ73 Q9CJ73]
+
{{#set: molecular weight=302.519    }}
−
** [http://www.uniprot.org/uniprot/P29433 P29433]
+
{{#set: common name=L-threo-dihydrosphingosine|threo-L-sphinganine|L-threo-DHS|L-threo-dihydrosphingosine (C18)|L-threo-sphinganine (C18)|safingol}}
−
** [http://www.uniprot.org/uniprot/P25817 P25817]
+
{{#set: consumed or produced by=RXN-12645}}
−
** [http://www.uniprot.org/uniprot/P22835 P22835]
+
−
** [http://www.uniprot.org/uniprot/P25814 P25814]
+
−
** [http://www.uniprot.org/uniprot/P0A7Y8 P0A7Y8]
+
−
** [http://www.uniprot.org/uniprot/Q55005 Q55005]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: ec number=EC-3.1.26.5}}
+
−
{{#set: gene associated=CHC_T00004542001_1}}
+
−
{{#set: in pathway=PWY0-1479}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=galdieria.sulphuraria}}
+

Revision as of 12:20, 18 January 2018

Metabolite CPD-13613

  • smiles:
    • CCCCCCCCCCCCCCCC(C(CO)[N+])O
  • inchi key:
    • InChIKey=OTKJDMGTUTTYMP-ROUUACIJSA-O
  • common name:
    • L-threo-sphinganine
  • molecular weight:
    • 302.519
  • Synonym(s):
    • L-threo-dihydrosphingosine
    • threo-L-sphinganine
    • L-threo-DHS
    • L-threo-dihydrosphingosine (C18)
    • L-threo-sphinganine (C18)
    • safingol

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CCCCCCCCCCCCCCCC(C(CO)[N+])O" cannot be used as a page name in this wiki.



Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=FASYN-INITIAL-PWY&oldid=7582"