Difference between revisions of "PWY-6457"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRYPTOPHAN--TRNA-LIGASE-RXN TRYPTOPHAN--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14919 RXN-14919] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRYPTOPHAN--TRNA-LIGASE-RXN TRYPTOPHAN--TRNA-LIGASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14919 RXN-14919] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** Tryptophan--tRNA ligase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.1.1.2 EC-6.1.1.2]
+
** [http://enzyme.expasy.org/EC/2.1.1.95 EC-2.1.1.95]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[TRP-tRNAs]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[TRP]][c] '''=>''' 1 [[Charged-TRP-tRNAs]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
+
** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[CPD-15839]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-15837]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a tRNAtrp[c] '''+''' 1 ATP[c] '''+''' 1 L-tryptophan[c] '''=>''' 1 an L-tryptophanyl-[tRNAtrp][c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
+
** 1 S-adenosyl-L-methionine[c] '''+''' 1 δ-tocotrienol[c] '''=>''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 β-tocotrienol[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00002342001_1]]
+
* [[CHC_T00000837001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00010058001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00010058001_1]]
+
 
** [[pantograph]]-[[galdieria.sulphuraria]]
 
** [[pantograph]]-[[galdieria.sulphuraria]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
+
* [[PWY-7436]], vitamin E biosynthesis (tocotrienols): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7436 PWY-7436]
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 
*** [[galdieria.sulphuraria]]
 
*** [[galdieria.sulphuraria]]
−
* [[annotation]]:
 
−
** [[pathwaytools]]:
 
−
*** [[original_genome]]
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24080 24080]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03664 R03664]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P23381 P23381]
 
−
** [http://www.uniprot.org/uniprot/Q9ZD76 Q9ZD76]
 
−
** [http://www.uniprot.org/uniprot/O84589 O84589]
 
−
** [http://www.uniprot.org/uniprot/Q9PIB4 Q9PIB4]
 
−
** [http://www.uniprot.org/uniprot/Q9CJD1 Q9CJD1]
 
−
** [http://www.uniprot.org/uniprot/P43835 P43835]
 
−
** [http://www.uniprot.org/uniprot/Q9Z7A4 Q9Z7A4]
 
−
** [http://www.uniprot.org/uniprot/Q9WYW2 Q9WYW2]
 
−
** [http://www.uniprot.org/uniprot/O26352 O26352]
 
−
** [http://www.uniprot.org/uniprot/O51038 O51038]
 
−
** [http://www.uniprot.org/uniprot/Q9ZJX4 Q9ZJX4]
 
−
** [http://www.uniprot.org/uniprot/Q9JTQ0 Q9JTQ0]
 
−
** [http://www.uniprot.org/uniprot/Q58810 Q58810]
 
−
** [http://www.uniprot.org/uniprot/O83640 O83640]
 
−
** [http://www.uniprot.org/uniprot/P67590 P67590]
 
−
** [http://www.uniprot.org/uniprot/O67115 O67115]
 
−
** [http://www.uniprot.org/uniprot/P47372 P47372]
 
−
** [http://www.uniprot.org/uniprot/P32921 P32921]
 
−
** [http://www.uniprot.org/uniprot/Q12109 Q12109]
 
−
** [http://www.uniprot.org/uniprot/Q49901 Q49901]
 
−
** [http://www.uniprot.org/uniprot/P75510 P75510]
 
−
** [http://www.uniprot.org/uniprot/O42875 O42875]
 
−
** [http://www.uniprot.org/uniprot/O96771 O96771]
 
−
** [http://www.uniprot.org/uniprot/P17248 P17248]
 
−
** [http://www.uniprot.org/uniprot/P21656 P21656]
 
−
** [http://www.uniprot.org/uniprot/P04803 P04803]
 
−
** [http://www.uniprot.org/uniprot/P00954 P00954]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=Tryptophan--tRNA ligase}}
+
{{#set: ec number=EC-2.1.1.95}}
−
{{#set: ec number=EC-6.1.1.2}}
+
{{#set: gene associated=CHC_T00000837001_1}}
−
{{#set: gene associated=CHC_T00002342001_1|CHC_T00010058001|CHC_T00010058001_1}}
+
{{#set: in pathway=PWY-7436}}
−
{{#set: in pathway=TRNA-CHARGING-PWY}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction source=galdieria.sulphuraria}}
 
{{#set: reconstruction source=galdieria.sulphuraria}}
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=original_genome}}
 

Revision as of 12:25, 18 January 2018

Reaction RXN-14919

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7436, vitamin E biosynthesis (tocotrienols): PWY-7436
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-6457&oldid=8000"