Difference between revisions of "COBALSYN-PWY"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-469 RXN66-469] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-methyl-branched fatty acy...")
 
(Created page with "Category:Gene == Gene CHC_T00008947001 == * left end position: ** 153681 * transcription direction: ** POSITIVE * right end position: ** 154535 * centisome position: ** 55...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-469 RXN66-469] ==
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== Gene CHC_T00008947001 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 153681
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* common name:
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* transcription direction:
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** 3-methyl-branched fatty acyl-CoA ligase
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** POSITIVE
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** long-chain-fatty-acid-CoA ligase
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* right end position:
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* ec number:
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** 154535
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
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* centisome position:
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** 55.06168   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[PROTEIN-KINASE-RXN]]
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** 1 [[3-Methyl-Saturated-Fatty-Acids]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[3-Methyl-Saturated-Fatty-Acyl-CoA]][c]
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** original_genome
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* With common name(s):
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***automated-name-match
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** 1 a 3-methyl-branched 2,3,4-saturated fatty acid[c] '''+''' 1 coenzyme A[c] '''+''' 1 ATP[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 a 3-methyl-branched 2,3,4-saturated fatty acyl-CoA[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[CHC_T00008811001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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* [[CHC_T00008160001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00008811001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00008500001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00009428001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00009428001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[PWY66-387]], fatty acid α-oxidation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-387 PWY66-387]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[original_genome]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=153681}}
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{{#set: common name=3-methyl-branched fatty acyl-CoA ligase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=long-chain-fatty-acid-CoA ligase}}
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{{#set: right end position=154535}}
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{{#set: ec number=EC-6.2.1.3}}
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{{#set: centisome position=55.06168    }}
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{{#set: gene associated=CHC_T00008811001|CHC_T00008160001_1|CHC_T00008811001_1|CHC_T00008500001_1|CHC_T00009428001_1|CHC_T00009428001}}
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{{#set: reaction associated=PROTEIN-KINASE-RXN}}
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{{#set: in pathway=PWY66-387}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}
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Revision as of 12:30, 18 January 2018

Gene CHC_T00008947001

  • left end position:
    • 153681
  • transcription direction:
    • POSITIVE
  • right end position:
    • 154535
  • centisome position:
    • 55.06168
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=COBALSYN-PWY&oldid=8414"