Difference between revisions of "PWY66-241"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.32-RXN 2.5.1.32-RXN] == * direction: ** LEFT-TO-RIGHT * Synonym(s): ** PSase ** geranylgerany...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.3.1.17-RXN 4.3.1.17-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** similar to serine deh...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.32-RXN 2.5.1.32-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.3.1.17-RXN 4.3.1.17-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** similar to serine dehydratase
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/4.3.1.17 EC-4.3.1.17]
 
* Synonym(s):
 
* Synonym(s):
−
** PSase
 
−
** geranylgeranyl-diphosphate geranylgeranyltransferase
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2 [[GERANYLGERANYL-PP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CPD-464]][c]
+
** 1 [[SER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[PYRUVATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2 geranylgeranyl diphosphate[c] '''=>''' 1 diphosphate[c] '''+''' 1 prephytoene diphosphate[c]
+
** 1 L-serine[c] '''=>''' 1 ammonium[c] '''+''' 1 pyruvate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* [[CHC_T00009480001]]
 +
** ORIGINAL_GENOME
 +
***AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6287]], neurosporene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6287 PWY-6287]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6475]], trans-lycopene biosynthesis II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6475 PWY-6475]
 
−
** '''8''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[annotation]]:
 
* [[annotation]]:
Line 25: Line 27:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22296 22296]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19169 19169]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02065 R02065]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00220 R00220]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P53609 P53609]
+
** [http://www.uniprot.org/uniprot/Q7M194 Q7M194]
−
** [http://www.uniprot.org/uniprot/P37295 P37295]
+
** [http://www.uniprot.org/uniprot/P30744 P30744]
−
** [http://www.uniprot.org/uniprot/P22872 P22872]
+
** [http://www.uniprot.org/uniprot/Q9JX54 Q9JX54]
−
** [http://www.uniprot.org/uniprot/P53610 P53610]
+
** [http://www.uniprot.org/uniprot/P56072 P56072]
−
** [http://www.uniprot.org/uniprot/P53612 P53612]
+
** [http://www.uniprot.org/uniprot/P25379 P25379]
−
** [http://www.uniprot.org/uniprot/P17056 P17056]
+
** [http://www.uniprot.org/uniprot/P16095 P16095]
−
** [http://www.uniprot.org/uniprot/P49293 P49293]
+
** [http://www.uniprot.org/uniprot/P20132 P20132]
 +
** [http://www.uniprot.org/uniprot/P09367 P09367]
 +
** [http://www.uniprot.org/uniprot/Q9PM51 Q9PM51]
 +
** [http://www.uniprot.org/uniprot/P17324 P17324]
 +
** [http://www.uniprot.org/uniprot/P80212 P80212]
 +
** [http://www.uniprot.org/uniprot/P80213 P80213]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=PSase|geranylgeranyl-diphosphate geranylgeranyltransferase}}
+
{{#set: common name=similar to serine dehydratase}}
−
{{#set: in pathway=PWY-6287|PWY-6475}}
+
{{#set: ec number=EC-4.3.1.17}}
 +
{{#set: gene associated=CHC_T00009480001}}
 +
{{#set: in pathway=}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction source=original_genome}}
 
{{#set: reconstruction source=original_genome}}

Revision as of 12:30, 18 January 2018

Reaction 4.3.1.17-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • similar to serine dehydratase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-serine[c] => 1 ammonium[c] + 1 pyruvate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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