Difference between revisions of "PWY-6325"

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(Created page with "Category:Gene == Gene CHC_T00008981001 == * left end position: ** 118909 * transcription direction: ** POSITIVE * right end position: ** 120252 * centisome position: ** 60...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13616 RXN-13616] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene CHC_T00008981001 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13616 RXN-13616] ==
* left end position:
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* direction:
** 118909
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** LEFT-TO-RIGHT
* transcription direction:
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* ec number:
** POSITIVE
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** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
* right end position:
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** 120252
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* centisome position:
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** 60.32468   
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* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
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* With identifiers:
** original_genome
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** 1 [[T2-DECENOYL-COA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD0-2244]][c]
***automated-name-match
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* With common name(s):
* [[METHYLACETOACETYLCOATHIOL-RXN]]
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** 1 trans-dec-2-enoyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 (S)-3-hydroxydecanoyl-CoA[c]
** original_genome
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***automated-name-match
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== Genes associated with this reaction  ==
* [[RXN-12561]]
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Genes have been associated with this reaction based on different elements listed below.
** original_genome
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* [[CHC_T00009349001_1]]
***automated-name-match
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** [[pantograph]]-[[galdieria.sulphuraria]]
== Pathways associated ==
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* [[CHC_T00009422001_1]]
* [[P162-PWY]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
* [[PWY-5177]]
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* [[CHC_T00009110001_1]]
* [[PWY-6583]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
* [[P163-PWY]]
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== Pathways  ==
* [[PWY-6883]]
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* [[PWY-7094]], fatty acid salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7094 PWY-7094]
* [[PWY-5676]]
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** '''4''' reactions found over '''6''' reactions in the full pathway
* [[PWY-6588]]
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== Reconstruction information  ==
* [[PWY-7779]]
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* [[orthology]]:
* [[PWY-7778]]
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** [[pantograph]]:
* [[PWY1-3]]
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*** [[galdieria.sulphuraria]]
* [[PWY-5789]]
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* [[annotation]]:
* [[PWY-6876]]
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** [[pathwaytools]]:
* [[CENTFERM-PWY]]
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*** [[original_genome]]
* [[PWY-7391]]
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* [[PWY-5741]]
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* [[PWY-5109]]
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* [[PWY-6174]]
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* [[ACETOACETATE-DEG-PWY]]
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* [[PWY66-367]]
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* [[ILEUDEG-PWY]]
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* [[PWY-7216]]
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* [[PWY-922]]
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* [[PWY66-368]]
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* [[PWY-7401]]
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* [[PWY-6863]]
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* [[PWY-7524]]
+
 
== External links  ==
 
== External links  ==
{{#set: left end position=118909}}
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* RHEA:
{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31193 31193]
{{#set: right end position=120252}}
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* LIGAND-RXN:
{{#set: centisome position=60.32468    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R04744 R04744]
{{#set: reaction associated=ACETYL-COA-ACETYLTRANSFER-RXN|METHYLACETOACETYLCOATHIOL-RXN|RXN-12561}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: pathway associated=P162-PWY|PWY-5177|PWY-6583|P163-PWY|PWY-6883|PWY-5676|PWY-6588|PWY-7779|PWY-7778|PWY1-3|PWY-5789|PWY-6876|CENTFERM-PWY|PWY-7391|PWY-5741|PWY-5109|PWY-6174|ACETOACETATE-DEG-PWY|PWY66-367|ILEUDEG-PWY|PWY-7216|PWY-922|PWY66-368|PWY-7401|PWY-6863|PWY-7524}}
+
{{#set: ec number=EC-4.2.1.17}}
 +
{{#set: gene associated=CHC_T00009349001_1|CHC_T00009422001_1|CHC_T00009110001_1}}
 +
{{#set: in pathway=PWY-7094}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=pantograph}}
 +
{{#set: reconstruction source=galdieria.sulphuraria}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=original_genome}}

Revision as of 12:32, 18 January 2018

Reaction RXN-13616

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 trans-dec-2-enoyl-CoA[c] + 1 H2O[c] => 1 (S)-3-hydroxydecanoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7094, fatty acid salvage: PWY-7094
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links