Difference between revisions of "HYDROG-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=4-FUMARYL-ACETOACETATE 4-FUMARYL-ACETOACETATE] == * smiles: ** C([O-])(=O)C=CC(=O)CC(=O)CC([O-]...")
 
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=4-FUMARYL-ACETOACETATE 4-FUMARYL-ACETOACETATE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HYDROG-RXN HYDROG-RXN] ==
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* smiles:
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* direction:
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** C([O-])(=O)C=CC(=O)CC(=O)CC([O-])=O
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** REVERSIBLE
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* inchi key:
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* ec number:
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** InChIKey=GACSIVHAIFQKTC-OWOJBTEDSA-L
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** [http://enzyme.expasy.org/EC/1.12.7.2 EC-1.12.7.2]
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* common name:
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** 4-fumaryl-acetoacetate
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* molecular weight:
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** 198.132   
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[FUMARYLACETOACETASE-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[HYDROGEN-MOLECULE]][c] '''+''' 2 [[Oxidized-ferredoxins]][c] '''<=>''' 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c]
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* [[MALEYLACETOACETATE-ISOMERASE-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 H2[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c] '''<=>''' 2 H+[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c]
 +
 
 +
== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00004440001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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== Pathways  ==
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* [[GLUDEG-II-PWY]], L-glutamate degradation VII (to butanoate): [http://metacyc.org/META/NEW-IMAGE?object=GLUDEG-II-PWY GLUDEG-II-PWY]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6785]], hydrogen production VIII: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6785 PWY-6785]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY4LZ-257]], superpathway of fermentation (Chlamydomonas reinhardtii): [http://metacyc.org/META/NEW-IMAGE?object=PWY4LZ-257 PWY4LZ-257]
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** '''7''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-6780]], hydrogen production VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6780 PWY-6780]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-6759]], hydrogen production III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6759 PWY-6759]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5459934 5459934]
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** [http://www.genome.jp/dbget-bin/www_bget?R00019 R00019]
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* HMDB : HMDB01268
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* UNIPROT:
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P27648 P27648]
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** [http://www.genome.jp/dbget-bin/www_bget?C01061 C01061]
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** [http://www.uniprot.org/uniprot/P31892 P31892]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/O25350 O25350]
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** [http://www.chemspider.com/Chemical-Structure.4573657.html 4573657]
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** [http://www.uniprot.org/uniprot/O67092 O67092]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P31891 P31891]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=18034 18034]
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** [http://www.uniprot.org/uniprot/P0AAJ8 P0AAJ8]
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* METABOLIGHTS : MTBLC18034
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** [http://www.uniprot.org/uniprot/O66894 O66894]
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{{#set: smiles=C([O-])(=O)C=CC(=O)CC(=O)CC([O-])=O}}
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** [http://www.uniprot.org/uniprot/P0AAM1 P0AAM1]
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{{#set: inchi key=InChIKey=GACSIVHAIFQKTC-OWOJBTEDSA-L}}
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** [http://www.uniprot.org/uniprot/P31898 P31898]
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{{#set: common name=4-fumaryl-acetoacetate}}
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** [http://www.uniprot.org/uniprot/P0ACE0 P0ACE0]
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{{#set: molecular weight=198.132    }}
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** [http://www.uniprot.org/uniprot/O28891 O28891]
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{{#set: consumed by=FUMARYLACETOACETASE-RXN}}
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** [http://www.uniprot.org/uniprot/O66895 O66895]
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{{#set: produced by=MALEYLACETOACETATE-ISOMERASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q9ZLK4 Q9ZLK4]
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** [http://www.uniprot.org/uniprot/Q9WY44 Q9WY44]
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** [http://www.uniprot.org/uniprot/Q46508 Q46508]
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** [http://www.uniprot.org/uniprot/O66896 O66896]
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** [http://www.uniprot.org/uniprot/O67095 O67095]
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** [http://www.uniprot.org/uniprot/Q9PN32 Q9PN32]
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** [http://www.uniprot.org/uniprot/P13061 P13061]
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** [http://www.uniprot.org/uniprot/Q9UYN3 Q9UYN3]
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** [http://www.uniprot.org/uniprot/P16429 P16429]
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** [http://www.uniprot.org/uniprot/O52683 O52683]
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** [http://www.uniprot.org/uniprot/P13066 P13066]
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** [http://www.uniprot.org/uniprot/O25349 O25349]
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** [http://www.uniprot.org/uniprot/P0AAK1 P0AAK1]
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** [http://www.uniprot.org/uniprot/P29166 P29166]
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** [http://www.uniprot.org/uniprot/P07603 P07603]
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** [http://www.uniprot.org/uniprot/P13628 P13628]
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** [http://www.uniprot.org/uniprot/P0ACD8 P0ACD8]
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** [http://www.uniprot.org/uniprot/P69739 P69739]
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** [http://www.uniprot.org/uniprot/P12636 P12636]
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** [http://www.uniprot.org/uniprot/P12635 P12635]
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** [http://www.uniprot.org/uniprot/Q59262 Q59262]
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** [http://www.uniprot.org/uniprot/P33375 P33375]
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** [http://www.uniprot.org/uniprot/P33374 P33374]
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** [http://www.uniprot.org/uniprot/P21950 P21950]
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** [http://www.uniprot.org/uniprot/P21949 P21949]
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** [http://www.uniprot.org/uniprot/P23000 P23000]
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** [http://www.uniprot.org/uniprot/Q7M121 Q7M121]
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** [http://www.uniprot.org/uniprot/P15283 P15283]
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** [http://www.uniprot.org/uniprot/P15284 P15284]
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** [http://www.uniprot.org/uniprot/P16430 P16430]
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** [http://www.uniprot.org/uniprot/P16431 P16431]
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** [http://www.uniprot.org/uniprot/P16432 P16432]
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** [http://www.uniprot.org/uniprot/P16433 P16433]
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** [http://www.uniprot.org/uniprot/P17633 P17633]
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** [http://www.uniprot.org/uniprot/P17632 P17632]
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** [http://www.uniprot.org/uniprot/P18191 P18191]
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** [http://www.uniprot.org/uniprot/P18637 P18637]
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** [http://www.uniprot.org/uniprot/P18636 P18636]
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** [http://www.uniprot.org/uniprot/Q46606 Q46606]
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** [http://www.uniprot.org/uniprot/P31875 P31875]
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** [http://www.uniprot.org/uniprot/Q7M0Y1 Q7M0Y1]
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** [http://www.uniprot.org/uniprot/Q7M0Y0 Q7M0Y0]
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** [http://www.uniprot.org/uniprot/Q9S8S0 Q9S8S0]
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** [http://www.uniprot.org/uniprot/P31883 P31883]
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** [http://www.uniprot.org/uniprot/P21960 P21960]
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** [http://www.uniprot.org/uniprot/Q43953 Q43953]
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** [http://www.uniprot.org/uniprot/O96948 O96948]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-1.12.7.2}}
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{{#set: gene associated=CHC_T00004440001_1}}
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{{#set: in pathway=GLUDEG-II-PWY|PWY-6785|PWY4LZ-257|PWY-6780|PWY-6759}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 18:34, 9 January 2019

Reaction HYDROG-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • GLUDEG-II-PWY, L-glutamate degradation VII (to butanoate): GLUDEG-II-PWY
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-6785, hydrogen production VIII: PWY-6785
    • 1 reactions found over 1 reactions in the full pathway
  • PWY4LZ-257, superpathway of fermentation (Chlamydomonas reinhardtii): PWY4LZ-257
    • 7 reactions found over 13 reactions in the full pathway
  • PWY-6780, hydrogen production VI: PWY-6780
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6759, hydrogen production III: PWY-6759
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=HYDROG-RXN&oldid=23250"