Difference between revisions of "PSERTRANSAM-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=XANTHINE-OXIDASE-RXN XANTHINE-OXIDASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http:/...")
 
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=XANTHINE-OXIDASE-RXN XANTHINE-OXIDASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSERTRANSAM-RXN PSERTRANSAM-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 +
* common name:
 +
** phosphoserine aminotransferase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.17.3.2 EC-1.17.3.2]
+
** [http://enzyme.expasy.org/EC/2.6.1.52 EC-2.6.1.52]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[XANTHINE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[URATE]][c]
+
** 1 [[3-P-SERINE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[3-P-HYDROXYPYRUVATE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 xanthine[c] '''+''' 1 H2O[c] '''+''' 1 oxygen[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 urate[c]
+
** 1 3-phospho-L-serine[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 L-glutamate[c] '''+''' 1 3-phospho-hydroxypyruvate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00006932001_1]]
+
* Gene: [[CHC_T00009221001]]
−
** [[pantograph]]-[[a.taliana]]
+
** Source: [[annotation-original_genome]]
−
* [[CHC_T00006216001_1]]
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[a.taliana]]
+
* Gene: [[CHC_T00000094001_1]]
−
* [[CHC_T00000194001_1]]
+
** Source: [[orthology-arabidopsis_thaliana]]
−
** [[pantograph]]-[[a.taliana]]
+
* Gene: [[CHC_T00009221001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6999]], theophylline degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6999 PWY-6999]
+
* [[SERSYN-PWY]], L-serine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=SERSYN-PWY SERSYN-PWY]
−
** '''2''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6538]], caffeine degradation III (bacteria, via demethylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6538 PWY-6538]
+
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[a.taliana]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21132 21132]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14329 14329]
−
* LIGAND-RXN:
+
−
** [http://www.genome.jp/dbget-bin/www_bget?R02107 R02107]
+
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P47989 P47989]
+
** [http://www.uniprot.org/uniprot/P10658 P10658]
−
** [http://www.uniprot.org/uniprot/Q00519 Q00519]
+
** [http://www.uniprot.org/uniprot/P23721 P23721]
−
** [http://www.uniprot.org/uniprot/Q62637 Q62637]
+
** [http://www.uniprot.org/uniprot/Q9PIH3 Q9PIH3]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
** [http://www.uniprot.org/uniprot/Q9CHW5 Q9CHW5]
−
{{#set: ec number=EC-1.17.3.2}}
+
** [http://www.uniprot.org/uniprot/P44336 P44336]
−
{{#set: gene associated=CHC_T00006932001_1|CHC_T00006216001_1|CHC_T00000194001_1}}
+
** [http://www.uniprot.org/uniprot/O34370 O34370]
−
{{#set: in pathway=PWY-6999|PWY-6538}}
+
** [http://www.uniprot.org/uniprot/P62676 P62676]
−
{{#set: reconstruction category=orthology}}
+
** [http://www.uniprot.org/uniprot/P33330 P33330]
−
{{#set: reconstruction tool=pantograph}}
+
** [http://www.uniprot.org/uniprot/P19689 P19689]
−
{{#set: reconstruction source=a.taliana}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R04173 R04173]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=phosphoserine aminotransferase}}
 +
{{#set: ec number=EC-2.6.1.52}}
 +
{{#set: gene associated=CHC_T00009221001|CHC_T00000094001_1|CHC_T00009221001_1}}
 +
{{#set: in pathway=SERSYN-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 17:36, 9 January 2019

Reaction PSERTRANSAM-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • phosphoserine aminotransferase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • SERSYN-PWY, L-serine biosynthesis: SERSYN-PWY
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PSERTRANSAM-RXN&oldid=23287"