Difference between revisions of "RXN-16621"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-RXN1HP7-17 TRANS-RXN1HP7-17] == * direction: ** LEFT-TO-RIGHT * common name: ** TRANS-RXN1HP7...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16621 RXN-16621] == * direction: ** LEFT-TO-RIGHT * common name: ** Beta-ketoacyl synthase * ec...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16621 RXN-16621] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** Beta-ketoacyl synthase |
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41] | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 | + | ** 1 [[5Z-tetradec-5-enoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[7Z-3-oxo-hexadec-7-enoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ACP]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 a (5Z)-tetradec-5-enoyl-[acp][c] '''+''' 1 a malonyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 a (7Z)-3-oxo-hexadec-7-enoyl-[acp][c] '''+''' 1 CO2[c] '''+''' 1 a holo-[acyl-carrier protein][c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[CHC_T00009465001]] |
| − | ** [[ | + | ** Source: [[annotation-original_genome]] |
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | * Gene: [[CHC_T00009465001_1]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
| + | * [[PWY-7664]], oleate biosynthesis IV (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7664 PWY-7664] | ||
| + | ** '''10''' reactions found over '''14''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]]: | + | * Category: [[orthology]] |
| − | ** [[pantograph]]: | + | ** Source: [[orthology-ectocarpus_siliculosus]] |
| − | *** [[ | + | *** Tool: [[pantograph]] |
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-original_genome]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=Beta-ketoacyl synthase}} |
| − | {{#set: gene associated= | + | {{#set: ec number=EC-2.3.1.41}} |
| − | {{#set: in pathway=}} | + | {{#set: gene associated=CHC_T00009465001|CHC_T00009465001_1}} |
| − | {{#set: reconstruction category=orthology}} | + | {{#set: in pathway=PWY-7664}} |
| − | {{#set: reconstruction | + | {{#set: reconstruction category=orthology|annotation}} |
| − | {{#set: reconstruction | + | {{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus}} |
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 16:46, 23 May 2018
Contents
Reaction RXN-16621
- direction:
- LEFT-TO-RIGHT
- common name:
- Beta-ketoacyl synthase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 5Z-tetradec-5-enoyl-ACPs[c] + 1 MALONYL-ACP[c] + 1 PROTON[c] => 1 7Z-3-oxo-hexadec-7-enoyl-ACPs[c] + 1 CARBON-DIOXIDE[c] + 1 ACP[c]
- With common name(s):
- 1 a (5Z)-tetradec-5-enoyl-[acp][c] + 1 a malonyl-[acp][c] + 1 H+[c] => 1 a (7Z)-3-oxo-hexadec-7-enoyl-[acp][c] + 1 CO2[c] + 1 a holo-[acyl-carrier protein][c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00009465001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00009465001_1
- Source: orthology-ectocarpus_siliculosus
Pathways
- PWY-7664, oleate biosynthesis IV (anaerobic): PWY-7664
- 10 reactions found over 14 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
