Difference between revisions of "RXN-11278"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GCVT-RXN GCVT-RXN] == * direction: ** REVERSIBLE * common name: ** aminomethyltransferase * ec numb...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11278 RXN-11278] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GCVT-RXN GCVT-RXN] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11278 RXN-11278] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
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** LEFT-TO-RIGHT
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* common name:
+
−
** aminomethyltransferase
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−
* ec number:
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** [http://enzyme.expasy.org/EC/2.1.2.10 EC-2.1.2.10]
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* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[THF-GLU-N]][c] '''+''' 1 [[AMINOMETHYLDIHYDROLIPOYL-GCVH]][c] '''<=>''' 1 [[DIHYDROLIPOYL-GCVH]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[METHYLENE-THF-GLU-N]][c]
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** 1 [[CPD-513]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[BENZALDEHYDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a tetrahydrofolate[c] '''+''' 1 a [glycine-cleavage complex H protein] N6-aminomethyldihydrolipoyl-L-lysine[c] '''<=>''' 1 a [glycine-cleavage complex H protein] N6-dihydrolipoyl-L-lysine[c] '''+''' 1 ammonium[c] '''+''' 1 a 5,10-methylene-tetrahydrofolate[c]
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** 1 3-hydroxy-3-phenylpropanoyl-CoA[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 benzaldehyde[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[CHC_T00008727001]]
 
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** ORIGINAL_GENOME
 
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***AUTOMATED-NAME-MATCH
 
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* [[CHC_T00008727001_1]]
 
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** [[pantograph]]-[[galdieria.sulphuraria]]
 
 
== Pathways  ==
 
== Pathways  ==
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* [[GLYCLEAV-PWY]], glycine cleavage: [http://metacyc.org/META/NEW-IMAGE?object=GLYCLEAV-PWY GLYCLEAV-PWY]
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* [[PWY-6446]], benzoate biosynthesis III (CoA-dependent, non-&beta;-oxidative): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6446 PWY-6446]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
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** '''4''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
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* Category: [[gap-filling]]
−
** [[pantograph]]:
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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*** [[galdieria.sulphuraria]]
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*** Tool: [[meneco]]
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* [[annotation]]:
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**** Comment: [[added for gapfilling]]
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** [[pathwaytools]]:
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*** [[original_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16945 16945]
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{{#set: in pathway=PWY-6446}}
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* LIGAND-RXN:
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{{#set: reconstruction category=gap-filling}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04125 R04125]
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{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
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* UNIPROT:
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{{#set: reconstruction tool=meneco}}
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** [http://www.uniprot.org/uniprot/P25285 P25285]
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{{#set: reconstruction comment=added for gapfilling}}
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** [http://www.uniprot.org/uniprot/P28337 P28337]
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** [http://www.uniprot.org/uniprot/P27248 P27248]
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** [http://www.uniprot.org/uniprot/Q9UZP8 Q9UZP8]
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** [http://www.uniprot.org/uniprot/Q9JVP2 Q9JVP2]
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** [http://www.uniprot.org/uniprot/P48728 P48728]
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** [http://www.uniprot.org/uniprot/P49364 P49364]
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** [http://www.uniprot.org/uniprot/P49095 P49095]
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** [http://www.uniprot.org/uniprot/P49363 P49363]
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−
** [http://www.uniprot.org/uniprot/P54260 P54260]
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** [http://www.uniprot.org/uniprot/P49361 P49361]
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−
** [http://www.uniprot.org/uniprot/P49362 P49362]
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** [http://www.uniprot.org/uniprot/O49954 O49954]
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** [http://www.uniprot.org/uniprot/P93256 P93256]
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−
** [http://www.uniprot.org/uniprot/O32955 O32955]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=aminomethyltransferase}}
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{{#set: ec number=EC-2.1.2.10}}
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−
{{#set: gene associated=CHC_T00008727001|CHC_T00008727001_1}}
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−
{{#set: in pathway=GLYCLEAV-PWY}}
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−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
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−
{{#set: reconstruction source=galdieria.sulphuraria}}
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−
{{#set: reconstruction category=annotation}}
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−
{{#set: reconstruction tool=pathwaytools}}
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−
{{#set: reconstruction source=original_genome}}
+

Latest revision as of 16:47, 23 May 2018

Reaction RXN-11278

  • direction:
    • LEFT-TO-RIGHT
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3-hydroxy-3-phenylpropanoyl-CoA[c] => 1 acetyl-CoA[c] + 1 benzaldehyde[c]

Genes associated with this reaction

Pathways

  • PWY-6446, benzoate biosynthesis III (CoA-dependent, non-β-oxidative): PWY-6446
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-11278&oldid=18122"