Difference between revisions of "RXN-12244"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CARBOXYMETHYL-HYDROXYPHENYLPROPCOA CARBOXYMETHYL-HYDROXYPHENYLPROPCOA] == * smiles: ** CC(C)(C(...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12244 RXN-12244] == * direction: ** LEFT-TO-RIGHT * common name: ** 15-cis-phytoene desaturase...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CARBOXYMETHYL-HYDROXYPHENYLPROPCOA CARBOXYMETHYL-HYDROXYPHENYLPROPCOA] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12244 RXN-12244] ==
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* smiles:
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* direction:
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** CC(C)(C(O)C(=O)NCCC(=O)NCCSC(C(CC([O-])=O)C(O)C1(=CC=CC=C1))=O)COP(=O)(OP(=O)(OCC2(C(OP([O-])(=O)[O-])C(O)C(O2)N4(C3(=C(C(N)=NC=N3)N=C4))))[O-])[O-]
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=DVSQFPLMOLPRDU-ACXVELPGSA-I
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* common name:
 
* common name:
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** 2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA
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** 15-cis-phytoene desaturase
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* molecular weight:
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** 968.692   
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* Synonym(s):
 
* Synonym(s):
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** (hydroxymethylphenyl)succinyl-CoA
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** phytoene desaturase (ambiguous)
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** 2-carboxymethyl-3-hydroxyphenylpropionyl-CoA
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** PDS
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** plant-type phytoene desaturase
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-905]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[PLASTOQUINONE]][c] '''+''' 1 [[CPD-13171]][c] '''=>''' 1 [[CPD-7535]][c] '''+''' 1 [[Plastoquinols]][c]
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* [[RXN-902]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 a plastoquinone[c] '''+''' 1 15,9'-di-cis-phytofluene[c] '''=>''' 1 9,15,9'-tri-cis-ζ-carotene[c] '''+''' 1 a plastoquinol[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00009492001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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== Pathways  ==
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* [[PWY-6475]], trans-lycopene biosynthesis II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6475 PWY-6475]
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** '''6''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90658758 90658758]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30198 30198]
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* CHEBI:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=28202 28202]
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{{#set: common name=15-cis-phytoene desaturase}}
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* LIGAND-CPD:
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{{#set: common name=phytoene desaturase (ambiguous)|PDS|plant-type phytoene desaturase}}
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** [http://www.genome.jp/dbget-bin/www_bget?C09819 C09819]
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{{#set: gene associated=CHC_T00009492001_1}}
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* HMDB : HMDB12145
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{{#set: in pathway=PWY-6475}}
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{{#set: smiles=CC(C)(C(O)C(=O)NCCC(=O)NCCSC(C(CC([O-])=O)C(O)C1(=CC=CC=C1))=O)COP(=O)(OP(=O)(OCC2(C(OP([O-])(=O)[O-])C(O)C(O2)N4(C3(=C(C(N)=NC=N3)N=C4))))[O-])[O-]}}
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{{#set: reconstruction category=orthology}}
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{{#set: inchi key=InChIKey=DVSQFPLMOLPRDU-ACXVELPGSA-I}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria}}
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{{#set: common name=2-carboxymethyl-3-hydroxyphenylpropanoyl-CoA}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: molecular weight=968.692    }}
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{{#set: common name=(hydroxymethylphenyl)succinyl-CoA|2-carboxymethyl-3-hydroxyphenylpropionyl-CoA}}
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{{#set: consumed by=RXN-905}}
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{{#set: produced by=RXN-902}}
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Latest revision as of 16:49, 23 May 2018

Reaction RXN-12244

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 15-cis-phytoene desaturase
  • Synonym(s):
    • phytoene desaturase (ambiguous)
    • PDS
    • plant-type phytoene desaturase

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a plastoquinone[c] + 1 15,9'-di-cis-phytofluene[c] => 1 9,15,9'-tri-cis-ζ-carotene[c] + 1 a plastoquinol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6475, trans-lycopene biosynthesis II (plants): PWY-6475
    • 6 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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