Difference between revisions of "RXN-8635"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LYSDECARBOX-RXN LYSDECARBOX-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.ex...")
 
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LYSDECARBOX-RXN LYSDECARBOX-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8635 RXN-8635] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.1.1.18 EC-4.1.1.18]
+
** [http://enzyme.expasy.org/EC/1.11.1.7 EC-1.11.1.7]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[LYS]][c] '''=>''' 1 [[CADAVERINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
** 1 [[CPD-8653]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''=>''' 2 [[WATER]][c] '''+''' 1 [[CPD-8890]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 L-lysine[c] '''=>''' 1 cadaverine[c] '''+''' 1 CO2[c]
+
** 1 betanidin[c] '''+''' 1 hydrogen peroxide[c] '''=>''' 2 H2O[c] '''+''' 1 betanidin quinone[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00000266001_1]]
+
* Gene: [[CHC_T00009550001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00010179001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00010161001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00009226001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00010024001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00007624001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00009490001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00009160001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00009006001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00002083001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00009008001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00010209001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00010133001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00000152001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00008640001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00009516001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00004197001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00009515001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00008836001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00002409001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00010263001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00010094001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00008590001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00010108001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00010243001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00008271001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00008578001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00008635001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00010289001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY0-461]], L-lysine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-461 PWY0-461]
+
* [[PWY-5461]], betanidin degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5461 PWY-5461]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-5468]], lupanine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5468 PWY-5468]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6381]], bisucaberin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6381 PWY-6381]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY0-1303]], aminopropylcadaverine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1303 PWY0-1303]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6328]], L-lysine degradation X: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6328 PWY-6328]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6375]], desferrioxamine E biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6375 PWY-6375]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6376]], desferrioxamine B biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6376 PWY-6376]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22352 22352]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00462 R00462]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P05033 P05033]
 
−
** [http://www.uniprot.org/uniprot/P21885 P21885]
 
−
** [http://www.uniprot.org/uniprot/P0A9H3 P0A9H3]
 
−
** [http://www.uniprot.org/uniprot/P52095 P52095]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-4.1.1.18}}
+
{{#set: ec number=EC-1.11.1.7}}
−
{{#set: gene associated=CHC_T00000266001_1}}
+
{{#set: gene associated=CHC_T00009550001_1|CHC_T00010179001_1|CHC_T00010161001_1|CHC_T00009226001_1|CHC_T00010024001_1|CHC_T00007624001_1|CHC_T00009490001_1|CHC_T00009160001_1|CHC_T00009006001_1|CHC_T00002083001_1|CHC_T00009008001_1|CHC_T00010209001_1|CHC_T00010133001_1|CHC_T00000152001_1|CHC_T00008640001_1|CHC_T00009516001_1|CHC_T00004197001_1|CHC_T00009515001_1|CHC_T00008836001_1|CHC_T00002409001_1|CHC_T00010263001_1|CHC_T00010094001_1|CHC_T00008590001_1|CHC_T00010108001_1|CHC_T00010243001_1|CHC_T00008271001_1|CHC_T00008578001_1|CHC_T00008635001_1|CHC_T00010289001_1}}
−
{{#set: in pathway=PWY0-461|PWY-5468|PWY-6381|PWY0-1303|PWY-6328|PWY-6375|PWY-6376}}
+
{{#set: in pathway=PWY-5461}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
 

Latest revision as of 17:43, 9 January 2019

Reaction RXN-8635

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5461, betanidin degradation: PWY-5461
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-8635&oldid=23430"