Difference between revisions of "RXN-14139"

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(Created page with "Category:Gene == Gene CHC_T00008341001 == * left end position: ** 6860 * transcription direction: ** POSITIVE * right end position: ** 8788 * centisome position: ** 1.5056...")
 
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene CHC_T00008341001 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14139 RXN-14139] ==
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* left end position:
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* direction:
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** 6860
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** LEFT-TO-RIGHT
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* transcription direction:
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* ec number:
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** POSITIVE
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** [http://enzyme.expasy.org/EC/3.6.1.9 EC-3.6.1.9]
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* right end position:
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** 8788
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* centisome position:
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** 1.5056175   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ALDHDEHYDROG-RXN]]
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* With identifiers:
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** original_genome
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** 1 [[UTP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[UMP]][c] '''+''' 1 [[PPI]][c]
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***automated-name-match
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* With common name(s):
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* [[R222-RXN]]
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** 1 UTP[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 UMP[c] '''+''' 1 diphosphate[c]
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** original_genome
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***automated-name-match
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== Genes associated with this reaction  ==
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* [[RXN-10089]]
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Genes have been associated with this reaction based on different elements listed below.
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** original_genome
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* Gene: [[CHC_T00009365001_1]]
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***automated-name-match
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** Source: [[orthology-galdieria.sulphuraria]]
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* [[RXN-10715]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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** original_genome
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** Source: [[orthology-arabidopsis_thaliana]]
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***automated-name-match
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== Pathways ==
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* [[RXN-10780]]
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* [[PWY-7821]], tunicamycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7821 PWY-7821]
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** original_genome
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** '''2''' reactions found over '''9''' reactions in the full pathway
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***automated-name-match
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== Reconstruction information  ==
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* [[RXN-10912]]
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* Category: [[orthology]]
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** original_genome
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** Source: [[orthology-galdieria.sulphuraria]]
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***automated-name-match
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*** Tool: [[pantograph]]
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* [[RXN-10917]]
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** Source: [[orthology-arabidopsis_thaliana]]
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** original_genome
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*** Tool: [[pantograph]]
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***automated-name-match
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** Source: [[orthology-ectocarpus_siliculosus]]
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* [[RXN-14224]]
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*** Tool: [[pantograph]]
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** original_genome
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***automated-name-match
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* [[RXN-14225]]
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** original_genome
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***automated-name-match
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* [[RXN-14280]]
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** original_genome
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***automated-name-match
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* [[RXN-16653]]
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** original_genome
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***automated-name-match
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* [[RXN-16654]]
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** original_genome
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***automated-name-match
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* [[RXN-16655]]
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** original_genome
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***automated-name-match
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* [[RXN-16656]]
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** original_genome
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***automated-name-match
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* [[RXN-17808]]
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** original_genome
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***automated-name-match
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* [[RXN-3443]]
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** original_genome
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***automated-name-match
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* [[RXN-37]]
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** original_genome
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***automated-name-match
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* [[RXN-4142]]
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** original_genome
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***automated-name-match
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* [[RXN-9758]]
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** original_genome
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***automated-name-match
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* [[RXN66-3]]
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** original_genome
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***automated-name-match
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* [[RXN66-472]]
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** original_genome
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***automated-name-match
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* [[RXN66-476]]
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** original_genome
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***automated-name-match
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* [[RXN66-479]]
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** original_genome
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***automated-name-match
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* [[RXN6666-5]]
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** original_genome
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***automated-name-match
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== Pathways associated ==
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* [[PWY-6342]]
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* [[PWY66-161]]
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* [[PWY66-21]]
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* [[P221-PWY]]
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* [[PWY66-162]]
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* [[PWY-7387]]
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* [[PWY66-389]]
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* [[PWY-2501]]
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* [[PWY-6054]]
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* [[PWY-7269]]
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* [[PWY-0]]
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* [[PWY-6055]]
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* [[PWY-7431]]
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* [[PWY6666-2]]
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* [[PWY66-387]]
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* [[PWY-2221]]
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* [[PWY-6181]]
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* [[PWY-6307]]
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* [[PWY-6313]]
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* [[PWY66-388]]
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* [[PWY-2724]]
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== External links  ==
 
== External links  ==
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{{#set: left end position=6860}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29398 29398]
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{{#set: right end position=8788}}
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* LIGAND-RXN:
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{{#set: centisome position=1.5056175    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R00662 R00662]
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{{#set: reaction associated=ALDHDEHYDROG-RXN|R222-RXN|RXN-10089|RXN-10715|RXN-10780|RXN-10912|RXN-10917|RXN-14224|RXN-14225|RXN-14280|RXN-16653|RXN-16654|RXN-16655|RXN-16656|RXN-17808|RXN-3443|RXN-37|RXN-4142|RXN-9758|RXN66-3|RXN66-472|RXN66-476|RXN66-479|RXN6666-5}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: pathway associated=PWY-6342|PWY66-161|PWY66-21|P221-PWY|PWY66-162|PWY-7387|PWY66-389|PWY-2501|PWY-6054|PWY-7269|PWY-0|PWY-6055|PWY-7431|PWY6666-2|PWY66-387|PWY-2221|PWY-6181|PWY-6307|PWY-6313|PWY66-388|PWY-2724}}
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{{#set: ec number=EC-3.6.1.9}}
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{{#set: gene associated=CHC_T00009365001_1}}
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{{#set: in pathway=PWY-7821}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 18:44, 9 January 2019

Reaction RXN-14139

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 UTP[c] + 1 H2O[c] => 1 H+[c] + 1 UMP[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7821, tunicamycin biosynthesis: PWY-7821
    • 2 reactions found over 9 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-14139&oldid=23452"