Difference between revisions of "POLYNUCLEOTIDE-ADENYLYLTRANSFERASE-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=4-CYTIDINE-5-DIPHOSPHO-2-C 4-CYTIDINE-5-DIPHOSPHO-2-C] == * smiles: ** CC(O)(CO)C(O)COP(OP([O-]...")
 
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=4-CYTIDINE-5-DIPHOSPHO-2-C 4-CYTIDINE-5-DIPHOSPHO-2-C] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=POLYNUCLEOTIDE-ADENYLYLTRANSFERASE-RXN POLYNUCLEOTIDE-ADENYLYLTRANSFERASE-RXN] ==
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* smiles:
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* direction:
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** CC(O)(CO)C(O)COP(OP([O-])(=O)OCC2(C(C(O)C(N1(C(N=C(C=C1)N)=O))O2)O))([O-])=O
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** REVERSIBLE
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* inchi key:
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** InChIKey=YFAUKWZNPVBCFF-XHIBXCGHSA-L
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* common name:
 
* common name:
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** 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol
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** Poly(A) polymerase
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* molecular weight:
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* ec number:
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** 519.295   
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** [http://enzyme.expasy.org/EC/2.7.7.19 EC-2.7.7.19]
 
* Synonym(s):
 
* Synonym(s):
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** CDP-ME
 
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** CDP-methyl-D-erythritol
 
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** 4-diphosphocytidyl-2C-methyl-D-erythritol
 
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** 4-diphosphocytidyl-2-C-methylerythritol
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[2.7.1.148-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[ATP]][c] '''+''' 1 [[mRNAs]][c] '''<=>''' 1 [[mRNAs]][c] '''+''' 1 [[PPI]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 ATP[c] '''+''' 1 an mRNA[c] '''<=>''' 1 an mRNA[c] '''+''' 1 diphosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00010036001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00010036001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00003995001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* UNIPROT:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=24970669 24970669]
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** [http://www.uniprot.org/uniprot/P44439 P44439]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/Q9I5A6 Q9I5A6]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57823 57823]
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** [http://www.uniprot.org/uniprot/Q9I657 Q9I657]
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* BIGG : 4c2me
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** [http://www.uniprot.org/uniprot/Q9JV08 Q9JV08]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/Q9KVV5 Q9KVV5]
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** [http://www.genome.jp/dbget-bin/www_bget?C11435 C11435]
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** [http://www.uniprot.org/uniprot/P0ABF1 P0ABF1]
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{{#set: smiles=CC(O)(CO)C(O)COP(OP([O-])(=O)OCC2(C(C(O)C(N1(C(N=C(C=C1)N)=O))O2)O))([O-])=O}}
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** [http://www.uniprot.org/uniprot/Q9CFC2 Q9CFC2]
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{{#set: inchi key=InChIKey=YFAUKWZNPVBCFF-XHIBXCGHSA-L}}
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** [http://www.uniprot.org/uniprot/P07617 P07617]
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{{#set: common name=4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol}}
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** [http://www.uniprot.org/uniprot/P32129 P32129]
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{{#set: molecular weight=519.295    }}
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** [http://www.uniprot.org/uniprot/Q98199 Q98199]
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{{#set: common name=CDP-ME|CDP-methyl-D-erythritol|4-diphosphocytidyl-2C-methyl-D-erythritol|4-diphosphocytidyl-2-C-methylerythritol}}
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** [http://www.uniprot.org/uniprot/Q98244 Q98244]
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{{#set: consumed by=2.7.1.148-RXN}}
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Poly(A) polymerase}}
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{{#set: ec number=EC-2.7.7.19}}
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{{#set: gene associated=CHC_T00010036001_1|CHC_T00010036001|CHC_T00003995001_1}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 17:45, 9 January 2019

Reaction POLYNUCLEOTIDE-ADENYLYLTRANSFERASE-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Poly(A) polymerase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 an mRNA[c] <=> 1 an mRNA[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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