Difference between revisions of "RXN-2541"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PALMITYL-COA PALMITYL-COA] == * smiles: ** CCCCCCCCCCCCCCCC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)...")
 
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PALMITYL-COA PALMITYL-COA] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2541 RXN-2541] ==
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* smiles:
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* direction:
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** CCCCCCCCCCCCCCCC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O
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** LEFT-TO-RIGHT
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* inchi key:
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* ec number:
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** InChIKey=MNBKLUUYKPBKDU-BBECNAHFSA-J
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** [http://enzyme.expasy.org/EC/2.5.1.115 EC-2.5.1.115]
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* common name:
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** palmitoyl-CoA
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* molecular weight:
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** 1001.915   
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* Synonym(s):
 
* Synonym(s):
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** Palmitoyl-CoA (n-C16:0CoA)
 
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** hexadecanoyl CoA
 
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** palmityl-CoA
 
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** palmitoyl coenzyme A
 
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** palmitoyl CoA
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-16032]]
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* With identifiers:
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* [[RXN-10664]]
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** 1 [[PROTON]][c] '''+''' 1 [[PHYTYL-PYROPHOSPHATE]][c] '''+''' 1 [[HOMOGENTISATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[MPBQ]][c] '''+''' 1 [[PPI]][c]
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* [[RXN-17743]]
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* With common name(s):
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* [[SERINE-C-PALMITOYLTRANSFERASE-RXN]]
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** 1 H+[c] '''+''' 1 phytyl diphosphate[c] '''+''' 1 homogentisate[c] '''=>''' 1 CO2[c] '''+''' 1 2-methyl-6-phytyl-1,4-benzoquinol[c] '''+''' 1 diphosphate[c]
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== Reaction(s) known to produce the compound ==
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* [[RXN-9623]]
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== Genes associated with this reaction  ==
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== Reaction(s) of unknown directionality ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00000930001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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** Source: [[orthology-arabidopsis_thaliana]]
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== Pathways  ==
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* [[PWY-1422]], vitamin E biosynthesis (tocopherols): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1422 PWY-1422]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-arabidopsis_thaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* CAS : 1763-10-6
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* LIGAND-RXN:
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* METABOLIGHTS : MTBLC57379
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** [http://www.genome.jp/dbget-bin/www_bget?R07500 R07500]
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* PUBCHEM:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=45266605 45266605]
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{{#set: ec number=EC-2.5.1.115}}
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* HMDB : HMDB01338
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{{#set: gene associated=CHC_T00000930001_1}}
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* LIGAND-CPD:
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{{#set: in pathway=PWY-1422}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00154 C00154]
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{{#set: reconstruction category=orthology}}
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* CHEBI:
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57379 57379]
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{{#set: reconstruction tool=pantograph}}
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* BIGG : pmtcoa
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{{#set: smiles=CCCCCCCCCCCCCCCC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O}}
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{{#set: inchi key=InChIKey=MNBKLUUYKPBKDU-BBECNAHFSA-J}}
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{{#set: common name=palmitoyl-CoA}}
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{{#set: molecular weight=1001.915    }}
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{{#set: common name=Palmitoyl-CoA (n-C16:0CoA)|hexadecanoyl CoA|palmityl-CoA|palmitoyl coenzyme A|palmitoyl CoA}}
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{{#set: consumed by=RXN-16032|RXN-10664|RXN-17743|SERINE-C-PALMITOYLTRANSFERASE-RXN}}
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{{#set: produced by=RXN-9623}}
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Latest revision as of 17:45, 9 January 2019

Reaction RXN-2541

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-1422, vitamin E biosynthesis (tocopherols): PWY-1422
    • 5 reactions found over 7 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-2541&oldid=23473"