Difference between revisions of "N-CARBAMOYLPUTRESCINE-AMIDASE-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=UDP-N-ACETYL-D-GLUCOSAMINE UDP-N-ACETYL-D-GLUCOSAMINE] == * smiles: ** CC(NC3(C(OP(OP(OCC1(C(C(...")
 
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=UDP-N-ACETYL-D-GLUCOSAMINE UDP-N-ACETYL-D-GLUCOSAMINE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=N-CARBAMOYLPUTRESCINE-AMIDASE-RXN N-CARBAMOYLPUTRESCINE-AMIDASE-RXN] ==
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* smiles:
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* direction:
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** CC(NC3(C(OP(OP(OCC1(C(C(C(O1)N2(C=CC(NC2=O)=O))O)O))([O-])=O)([O-])=O)OC(C(C3O)O)CO))=O
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** LEFT-TO-RIGHT
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* inchi key:
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* ec number:
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** InChIKey=LFTYTUAZOPRMMI-CFRASDGPSA-L
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** [http://enzyme.expasy.org/EC/3.5.1.53 EC-3.5.1.53]
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* common name:
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** UDP-N-acetyl-α-D-glucosamine
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* molecular weight:
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** 605.342   
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* Synonym(s):
 
* Synonym(s):
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** UDP-acetyl-D-glucosamine
 
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** UDP-GlcNAc
 
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** UDP-N-acetyl-glucosamine
 
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** uridine diphosphate N-acetylglucosamine
 
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** N-[2-[[[5-[(2,4-dioxo-1H-pyrimidin-1-yl)]-3,4-dihydroxy-tetrahydrofuran-2-yl]methoxy-hydroxy-phosphinoyl]oxy-hydroxy-phosphinoyl]oxy-4,5-dihydroxy-6-(hydroxymethyl)tetrahydropyran-3-yl]acetamide
 
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** UDP-2-acetamido-2-deoxy-α-D-glucose
 
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** UDP-N-acetyl-D-glucosamine
 
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** UDP-α-N-acetyl-D-glucosamine
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-8976]]
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* With identifiers:
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* [[2.7.8.15-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[CPD-597]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[PUTRESCINE]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* [[2.4.1.56-RXN]]
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* With common name(s):
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* [[RXN-6501]]
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** 1 H2O[c] '''+''' 1 N-carbamoylputrescine[c] '''+''' 2 H+[c] '''=>''' 1 putrescine[c] '''+''' 1 ammonium[c] '''+''' 1 CO2[c]
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* [[2.4.1.101-RXN]]
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* [[2.4.1.141-RXN]]
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== Genes associated with this reaction  ==
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== Reaction(s) known to produce the compound ==
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Genes have been associated with this reaction based on different elements listed below.
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== Reaction(s) of unknown directionality ==
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* Gene: [[CHC_T00006316001_1]]
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* [[NACGLCTRANS-RXN]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00006315001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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== Pathways  ==
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* [[PWY-43]], putrescine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-43 PWY-43]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[ARGDEG-III-PWY]], L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGDEG-III-PWY ARGDEG-III-PWY]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* CAS : 528-04-1
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* RHEA:
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* METABOLIGHTS : MTBLC57705
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22284 22284]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=16667373 16667373]
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** [http://www.genome.jp/dbget-bin/www_bget?R01152 R01152]
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* HMDB : HMDB00290
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{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
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{{#set: ec number=EC-3.5.1.53}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00043 C00043]
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{{#set: gene associated=CHC_T00006316001_1|CHC_T00006315001_1}}
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* CHEMSPIDER:
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{{#set: in pathway=PWY-43|ARGDEG-III-PWY}}
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** [http://www.chemspider.com/Chemical-Structure.17600409.html 17600409]
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{{#set: reconstruction category=orthology}}
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* CHEBI:
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-ectocarpus_siliculosus}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57705 57705]
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{{#set: reconstruction tool=pantograph}}
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* BIGG : uacgam
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{{#set: smiles=CC(NC3(C(OP(OP(OCC1(C(C(C(O1)N2(C=CC(NC2=O)=O))O)O))([O-])=O)([O-])=O)OC(C(C3O)O)CO))=O}}
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{{#set: inchi key=InChIKey=LFTYTUAZOPRMMI-CFRASDGPSA-L}}
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{{#set: common name=UDP-N-acetyl-α-D-glucosamine}}
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{{#set: molecular weight=605.342    }}
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{{#set: common name=UDP-acetyl-D-glucosamine|UDP-GlcNAc|UDP-N-acetyl-glucosamine|uridine diphosphate N-acetylglucosamine|N-[2-[[[5-[(2,4-dioxo-1H-pyrimidin-1-yl)]-3,4-dihydroxy-tetrahydrofuran-2-yl]methoxy-hydroxy-phosphinoyl]oxy-hydroxy-phosphinoyl]oxy-4,5-dihydroxy-6-(hydroxymethyl)tetrahydropyran-3-yl]acetamide|UDP-2-acetamido-2-deoxy-α-D-glucose|UDP-N-acetyl-D-glucosamine|UDP-α-N-acetyl-D-glucosamine}}
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{{#set: consumed by=RXN-8976|2.7.8.15-RXN|2.4.1.56-RXN|RXN-6501|2.4.1.101-RXN|2.4.1.141-RXN}}
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{{#set: consumed or produced by=NACGLCTRANS-RXN}}
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Latest revision as of 17:46, 9 January 2019

Reaction N-CARBAMOYLPUTRESCINE-AMIDASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-43, putrescine biosynthesis II: PWY-43
    • 1 reactions found over 3 reactions in the full pathway
  • ARGDEG-III-PWY, L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway): ARGDEG-III-PWY
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




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