Difference between revisions of "METHENYLTHFCYCLOHYDRO-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8038 RXN-8038] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/5.5.1...")
 
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8038 RXN-8038] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHENYLTHFCYCLOHYDRO-RXN METHENYLTHFCYCLOHYDRO-RXN] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/5.5.1 EC-5.5.1]
+
** [http://enzyme.expasy.org/EC/3.5.4.9 EC-3.5.4.9]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NEUROSPORENE]][c] '''<=>''' 1 [[CPD-7419]][c]
+
** 1 [[5-10-METHENYL-THF-GLU-N]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[FORMYL-THF-GLU-N]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 all-trans neurosporene[c] '''<=>''' 1 &beta;-zeacarotene[c]
+
** 1 a 5,10-methenyltetrahydrofolate[c] '''+''' 1 H2O[c] '''<=>''' 1 an N10-formyl-tetrahydrofolate[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00008813001_1]]
+
* Gene: [[CHC_T00008680001_1]]
−
** [[pantograph]]-[[a.taliana]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
* [[CHC_T00010004001_1]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
** [[pantograph]]-[[a.taliana]]
+
* Gene: [[CHC_T00008670001_1]]
−
* [[CHC_T00003979001_1]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
** [[pantograph]]-[[a.taliana]]
+
−
* [[CHC_T00009131001_1]]
+
−
** [[pantograph]]-[[a.taliana]]
+
−
* [[CHC_T00008616001_1]]
+
−
** [[pantograph]]-[[a.taliana]]
+
−
* [[CHC_T00008672001_1]]
+
−
** [[pantograph]]-[[a.taliana]]
+
−
* [[CHC_T00009303001_1]]
+
−
** [[pantograph]]-[[a.taliana]]
+
−
* [[CHC_T00009499001_1]]
+
−
** [[pantograph]]-[[a.taliana]]
+
−
* [[CHC_T00009062001_1]]
+
−
** [[pantograph]]-[[a.taliana]]
+
−
* [[CHC_T00009401001_1]]
+
−
** [[pantograph]]-[[a.taliana]]
+
−
* [[CHC_T00010245001_1]]
+
−
** [[pantograph]]-[[a.taliana]]
+
−
* [[CHC_T00008663001_1]]
+
−
** [[pantograph]]-[[a.taliana]]
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-5030]], L-histidine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5030 PWY-5030]
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[CODH-PWY]], reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=CODH-PWY CODH-PWY]
 +
** '''4''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-1722]], formate assimilation into 5,10-methylenetetrahydrofolate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1722 PWY-1722]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3841]], folate transformations II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841]
 +
** '''8''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-5497]], purine nucleobases degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5497 PWY-5497]
 +
** '''6''' reactions found over '''24''' reactions in the full pathway
 +
* [[P164-PWY]], purine nucleobases degradation I (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY]
 +
** '''3''' reactions found over '''17''' reactions in the full pathway
 +
* [[1CMET2-PWY]], N10-formyl-tetrahydrofolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=1CMET2-PWY 1CMET2-PWY]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201]
 +
** '''6''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-6613]], tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6613 PWY-6613]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[a.taliana]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23700 23700]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P09440 P09440]
 +
** [http://www.uniprot.org/uniprot/P07245 P07245]
 +
** [http://www.uniprot.org/uniprot/P11586 P11586]
 +
** [http://www.uniprot.org/uniprot/P18155 P18155]
 +
** [http://www.uniprot.org/uniprot/P44313 P44313]
 +
** [http://www.uniprot.org/uniprot/P47259 P47259]
 +
** [http://www.uniprot.org/uniprot/P13995 P13995]
 +
** [http://www.uniprot.org/uniprot/P54382 P54382]
 +
** [http://www.uniprot.org/uniprot/O67736 O67736]
 +
** [http://www.uniprot.org/uniprot/Q9JWI9 Q9JWI9]
 +
** [http://www.uniprot.org/uniprot/Q9PP68 Q9PP68]
 +
** [http://www.uniprot.org/uniprot/P24186 P24186]
 +
** [http://www.uniprot.org/uniprot/Q04448 Q04448]
 +
** [http://www.uniprot.org/uniprot/Q60006 Q60006]
 +
** [http://www.uniprot.org/uniprot/Q27772 Q27772]
 +
** [http://www.uniprot.org/uniprot/P51696 P51696]
 +
** [http://www.uniprot.org/uniprot/O68031 O68031]
 +
** [http://www.uniprot.org/uniprot/Q9ZTV0 Q9ZTV0]
 +
** [http://www.uniprot.org/uniprot/Q9X7F6 Q9X7F6]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04801 R04801]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01655 R01655]
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: ec number=EC-5.5.1}}
+
{{#set: ec number=EC-3.5.4.9}}
−
{{#set: gene associated=CHC_T00008813001_1|CHC_T00010004001_1|CHC_T00003979001_1|CHC_T00009131001_1|CHC_T00008616001_1|CHC_T00008672001_1|CHC_T00009303001_1|CHC_T00009499001_1|CHC_T00009062001_1|CHC_T00009401001_1|CHC_T00010245001_1|CHC_T00008663001_1}}
+
{{#set: gene associated=CHC_T00008680001_1|CHC_T00008670001_1}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=PWY-5030|CODH-PWY|PWY-1722|PWY-3841|PWY-5497|P164-PWY|1CMET2-PWY|PWY-2201|PWY-6613}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=a.taliana}}
 

Latest revision as of 18:48, 9 January 2019

Reaction METHENYLTHFCYCLOHYDRO-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5030, L-histidine degradation III: PWY-5030
    • 2 reactions found over 6 reactions in the full pathway
  • CODH-PWY, reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): CODH-PWY
    • 4 reactions found over 9 reactions in the full pathway
  • PWY-1722, formate assimilation into 5,10-methylenetetrahydrofolate: PWY-1722
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-3841, folate transformations II: PWY-3841
    • 8 reactions found over 11 reactions in the full pathway
  • PWY-5497, purine nucleobases degradation II (anaerobic): PWY-5497
    • 6 reactions found over 24 reactions in the full pathway
  • P164-PWY, purine nucleobases degradation I (anaerobic): P164-PWY
    • 3 reactions found over 17 reactions in the full pathway
  • 1CMET2-PWY, N10-formyl-tetrahydrofolate biosynthesis: 1CMET2-PWY
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-2201, folate transformations I: PWY-2201
    • 6 reactions found over 12 reactions in the full pathway
  • PWY-6613, tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate: PWY-6613
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links




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