Difference between revisions of "RXN-10696"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Long-Chain-Fatty-Acids Long-Chain-Fatty-Acids] == * common name: ** a long-chain fatty acid * S...")
 
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Long-Chain-Fatty-Acids Long-Chain-Fatty-Acids] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10696 RXN-10696] ==
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* direction:
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** a long-chain fatty acid
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** acyl-CoA oxidase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
 
* Synonym(s):
 
* Synonym(s):
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** LCFA
 
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** Long-Chain-Fatty-Acids
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-7904]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-11517]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[CPD-11518]][c]
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* [[RXN-12575]]
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* With common name(s):
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* [[RXN-12579]]
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** 1 oxygen[c] '''+''' 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoyl-CoA[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octa-2-enoyl-CoA[c]
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== Reaction(s) of unknown directionality ==
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* [[FATTY-ACID-SYNTHASE-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00009142001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00008935001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00008400001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00008478001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00008935001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00008400001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00009142001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00009531001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00007910001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00009531001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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== Pathways  ==
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* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
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** '''13''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=a long-chain fatty acid}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=LCFA|Long-Chain-Fatty-Acids}}
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{{#set: common name=acyl-CoA oxidase}}
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{{#set: consumed by=RXN-7904}}
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{{#set: ec number=EC-1.3.3.6}}
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{{#set: produced by=RXN-12575|RXN-12579}}
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{{#set: gene associated=CHC_T00009142001_1|CHC_T00008935001|CHC_T00008400001_1|CHC_T00008478001_1|CHC_T00008935001_1|CHC_T00008400001|CHC_T00009142001|CHC_T00009531001|CHC_T00007910001_1|CHC_T00009531001_1}}
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{{#set: consumed or produced by=FATTY-ACID-SYNTHASE-RXN}}
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{{#set: in pathway=PWY-735}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 18:49, 9 January 2019

Reaction RXN-10696

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acyl-CoA oxidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 oxygen[c] + 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octanoyl-CoA[c] => 1 hydrogen peroxide[c] + 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octa-2-enoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-735, jasmonic acid biosynthesis: PWY-735
    • 13 reactions found over 19 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-10696&oldid=23547"