Difference between revisions of "SERINE-C-PALMITOYLTRANSFERASE-RXN"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5939 PWY-5939] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
 
 
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5939 PWY-5939] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SERINE-C-PALMITOYLTRANSFERASE-RXN SERINE-C-PALMITOYLTRANSFERASE-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** (R)-acetoin biosynthesis II
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** serine palmitoyltransferase, LCB1 subunit
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** serine palmitoyltransferase, LCB2 subunit
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.50 EC-2.3.1.50]
 
* Synonym(s):
 
* Synonym(s):
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** D-acetoin biosynthesis II
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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* '''1''' reaction(s) found
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* With identifiers:
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** [[ACETOLACTSYN-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[SER]][c] '''+''' 1 [[PALMITYL-COA]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[DEHYDROSPHINGANINE]][c]
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== Reaction(s) not found ==
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* With common name(s):
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* '''1''' reaction(s) not found
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** 1 H+[c] '''+''' 1 L-serine[c] '''+''' 1 palmitoyl-CoA[c] '''=>''' 1 coenzyme A[c] '''+''' 1 CO2[c] '''+''' 1 3-dehydrosphinganine[c]
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** [http://metacyc.org/META/NEW-IMAGE?object=ACETOLACTATE-DECARBOXYLASE-RXN ACETOLACTATE-DECARBOXYLASE-RXN]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00008697001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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** Source: [[orthology-arabidopsis_thaliana]]
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* Gene: [[CHC_T00008326001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00008697001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00008326001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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== Pathways  ==
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* [[PWY3DJ-12]], ceramide de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-12 PWY3DJ-12]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[SPHINGOLIPID-SYN-PWY]], sphingolipid biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=SPHINGOLIPID-SYN-PWY SPHINGOLIPID-SYN-PWY]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5129]], sphingolipid biosynthesis (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5129 PWY-5129]
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** '''3''' reactions found over '''13''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-arabidopsis_thaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2}}
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* RHEA:
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{{#set: common name=(R)-acetoin biosynthesis II}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14761 14761]
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{{#set: common name=D-acetoin biosynthesis II}}
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* UNIPROT:
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{{#set: reaction found=1}}
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** [http://www.uniprot.org/uniprot/P25045 P25045]
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{{#set: reaction not found=1}}
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** [http://www.uniprot.org/uniprot/O15270 O15270]
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** [http://www.uniprot.org/uniprot/P48241 P48241]
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** [http://www.uniprot.org/uniprot/Q09925 Q09925]
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** [http://www.uniprot.org/uniprot/P40970 P40970]
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** [http://www.uniprot.org/uniprot/Q9XVI6 Q9XVI6]
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** [http://www.uniprot.org/uniprot/Q20375 Q20375]
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** [http://www.uniprot.org/uniprot/Q9M304 Q9M304]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R01281 R01281]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=serine palmitoyltransferase, LCB1 subunit}}
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{{#set: common name=serine palmitoyltransferase, LCB2 subunit}}
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{{#set: ec number=EC-2.3.1.50}}
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{{#set: gene associated=CHC_T00008697001_1|CHC_T00008326001|CHC_T00008697001|CHC_T00008326001_1}}
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{{#set: in pathway=PWY3DJ-12|SPHINGOLIPID-SYN-PWY|PWY-5129}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 15:58, 9 January 2019

Reaction SERINE-C-PALMITOYLTRANSFERASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • serine palmitoyltransferase, LCB1 subunit
    • serine palmitoyltransferase, LCB2 subunit
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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