Difference between revisions of "DIHYDROOROT-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SE-2 SE-2] == * smiles: ** [Se--] * inchi key: ** InChIKey=HMUBNCUQSSTAIB-UHFFFAOYSA-N * common...")
 
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SE-2 SE-2] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIHYDROOROT-RXN DIHYDROOROT-RXN] ==
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* smiles:
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* direction:
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** [Se--]
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** REVERSIBLE
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* inchi key:
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** InChIKey=HMUBNCUQSSTAIB-UHFFFAOYSA-N
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* common name:
 
* common name:
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** selenide
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** Glutamine-dependent carbamoyl-phosphate synthase, Aspartate carbamoyltransferase, Dihydroorotase
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* molecular weight:
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* ec number:
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** 78.96   
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** [http://enzyme.expasy.org/EC/3.5.2.3 EC-3.5.2.3]
 
* Synonym(s):
 
* Synonym(s):
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** selenide ion
 
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** Se-2
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[2.7.9.3-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[WATER]][c] '''+''' 1 [[DI-H-OROTATE]][c] '''<=>''' 1 [[CARBAMYUL-L-ASPARTATE]][c] '''+''' 1 [[PROTON]][c]
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* [[SELENOCYSTEINE-LYASE-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 H2O[c] '''+''' 1 (S)-dihydroorotate[c] '''<=>''' 1 N-carbamoyl-L-aspartate[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00010056001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00010056001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00005381001_1]]
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** Source: [[orthology-arabidopsis_thaliana]]
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* Gene: [[CHC_T00008596001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00006412001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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== Pathways  ==
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* [[PWY-5686]], UMP biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5686 PWY-5686]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7791]], UMP biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7791 PWY-7791]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7790]], UMP biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7790 PWY-7790]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-arabidopsis_thaliana]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 22541-48-6
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24296 24296]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=107674 107674]
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* UNIPROT:
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/P08955 P08955]
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** [http://www.chemspider.com/Chemical-Structure.96846.html 96846]
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** [http://www.uniprot.org/uniprot/P27708 P27708]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/Q91437 Q91437]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=15076 15076]
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** [http://www.uniprot.org/uniprot/Q58885 Q58885]
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* METABOLIGHTS : MTBLC15076
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** [http://www.uniprot.org/uniprot/Q9PIN6 Q9PIN6]
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{{#set: smiles=[Se--]}}
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** [http://www.uniprot.org/uniprot/P25995 P25995]
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{{#set: inchi key=InChIKey=HMUBNCUQSSTAIB-UHFFFAOYSA-N}}
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** [http://www.uniprot.org/uniprot/P20051 P20051]
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{{#set: common name=selenide}}
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** [http://www.uniprot.org/uniprot/P06204 P06204]
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{{#set: molecular weight=78.96    }}
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** [http://www.uniprot.org/uniprot/P05020 P05020]
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{{#set: common name=selenide ion|Se-2}}
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** [http://www.uniprot.org/uniprot/P31301 P31301]
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{{#set: consumed by=2.7.9.3-RXN}}
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** [http://www.uniprot.org/uniprot/Q9PNA0 Q9PNA0]
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{{#set: produced by=SELENOCYSTEINE-LYASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q9JVD6 Q9JVD6]
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** [http://www.uniprot.org/uniprot/P46538 P46538]
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** [http://www.uniprot.org/uniprot/P20054 P20054]
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** [http://www.uniprot.org/uniprot/P05990 P05990]
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** [http://www.uniprot.org/uniprot/Q06950 Q06950]
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** [http://www.uniprot.org/uniprot/P72934 P72934]
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** [http://www.uniprot.org/uniprot/P74438 P74438]
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** [http://www.uniprot.org/uniprot/O04904 O04904]
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** [http://www.uniprot.org/uniprot/P72170 P72170]
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** [http://www.uniprot.org/uniprot/O76138 O76138]
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** [http://www.uniprot.org/uniprot/O27199 O27199]
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** [http://www.uniprot.org/uniprot/P48795 P48795]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R01993 R01993]
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Glutamine-dependent carbamoyl-phosphate synthase, Aspartate carbamoyltransferase, Dihydroorotase}}
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{{#set: ec number=EC-3.5.2.3}}
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{{#set: gene associated=CHC_T00010056001|CHC_T00010056001_1|CHC_T00005381001_1|CHC_T00008596001_1|CHC_T00006412001_1}}
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{{#set: in pathway=PWY-5686|PWY-7791|PWY-7790}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-arabidopsis_thaliana}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 17:51, 9 January 2019

Reaction DIHYDROOROT-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Glutamine-dependent carbamoyl-phosphate synthase, Aspartate carbamoyltransferase, Dihydroorotase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5686, UMP biosynthesis I: PWY-5686
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-7791, UMP biosynthesis III: PWY-7791
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-7790, UMP biosynthesis II: PWY-7790
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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